runDE: runDE
In debrowser: Interactive Differential Expresion Analysis Browser
Description
Usage
Arguments
Value
Examples
Description
Run DE algorithms on the selected parameters. Output is
to be used for the interactive display.
Usage
1
Arguments
data,
A matrix that includes all the expression raw counts,
rownames has to be the gene, isoform or region names/IDs
columns,
is a vector that includes the columns that are going
to be analyzed. These columns has to match with the given data.
conds,
experimental conditions. The order has to match
with the column order
params,
all params for the DE methods
Value
de results
Examples
1
x <- runDE()
debrowser documentation built on Dec. 18, 2020, 2 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Run DE algorithms on the selected parameters. Output is to be used for the interactive display.
Usage
1 |
Arguments
data, |
A matrix that includes all the expression raw counts, rownames has to be the gene, isoform or region names/IDs |
columns, |
is a vector that includes the columns that are going to be analyzed. These columns has to match with the given data. |
conds, |
experimental conditions. The order has to match with the column order |
params, |
all params for the DE methods |
Value
de results
Examples
1 | x <- runDE()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.