getGSEA: getGSEA

In debrowser: Interactive Differential Expresion Analysis Browser

Description

Gathers the Enriched KEGG analysis data to be used within the GO Term plots.

Usage

getGSEA(
  dataset = NULL,
  pvalueCutoff = 0.01,
  org = "org.Hs.eg.db",
  sortfield = "log2FoldChange"
)

Arguments

dataset,	dataset
pvalueCutoff,	the p value cutoff
org,	the organism used
sortfield,	sort field for GSEA

Value

GSEA

Note

getGSEA

Examples

    x <- getGSEA()

debrowser documentation built on Dec. 18, 2020, 2 a.m.