An S4 class for storing data preprocessing results.
Valid
logical vector to indicate the genes left after filtering.
Xprep
Preprocessed data matrix.
Xproj
Preprocessed data matrix after perspective projection.
W
The matrix whose rows are loading vectors.
cluster
cluster results including two vectors. The first indicates the cluster to which each gene is allocated. The second is the number of genes in each cluster.
c.outlier
The clusters with the gene number smaller than MG.num.thres.
centers
The centers of candidate corner clusters (candidate clusters containing marker genes).
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