cytofkitShinyAPP: A Shiny APP to interactively visualize the analysis results

In cytofkit: cytofkit: an integrated mass cytometry data analysis pipeline

Description

Take the the RData object file saved by cytofkit as input, automatically load the data and allow exploration of the analysis results with interactive control

Usage

cytofkitShinyAPP(RData = NULL, onServer = FALSE)

Arguments

RData	Either the RData object file or data object, if missing, RData file need to be loaded on the ShinyAPP
onServer	Logical value, if TRUE, sets shinyApp host to 0.0.0.0 for other clients to access, otherwise defaults to 127.0.0.1 (local host)

Value

Opens shinyApp session for data visualisation

Author(s)

Hao Chen

Examples

d <- system.file('extdata', package = 'cytofkit')
Rdata <- list.files(d, pattern = '.RData$', full.names = TRUE)
#only for interactive sessions, remove hash to run
#cytofkitShinyAPP(Rdata)

Example output

Loading required package: ggplot2
Loading required package: plyr
Warning message:
no DISPLAY variable so Tk is not available 

cytofkit documentation built on Nov. 1, 2018, 3:50 a.m.