importNCLscan: Import circRNAs detected by NCLscan
In circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs
Description
Usage
Arguments
Value
Examples
View source: R/importFilesPredictionTool.R
Description
The function importNCLscan is specifically designed to read
and adapt the NCLscan v1.4 output file (e.g. MyProject.result). Only
intragenic circRNAs are kept in the analysis.
See https://github.com/TreesLab/NCLscan for more details.
Usage
1
importNCLscan(pathToFile)
Arguments
pathToFile
A character string specifying the path to the file
containing the detected circRNAs.
Value
A data frame.
Examples
1
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# Path to an example file containing circRNAs detected by NCLscan
pathToFile <- system.file("extdata", "nclscan/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs
importNCLscan(pathToFile)
circRNAprofiler documentation built on March 6, 2021, 2 a.m.
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Description Usage Arguments Value Examples
View source: R/importFilesPredictionTool.R
Description
The function importNCLscan is specifically designed to read and adapt the NCLscan v1.4 output file (e.g. MyProject.result). Only intragenic circRNAs are kept in the analysis. See https://github.com/TreesLab/NCLscan for more details.
Usage
1 | importNCLscan(pathToFile)
|
Arguments
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
Value
A data frame.
Examples
1 2 3 4 5 6 7 | # Path to an example file containing circRNAs detected by NCLscan
pathToFile <- system.file("extdata", "nclscan/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs
importNCLscan(pathToFile)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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