banocc: banocc: A package for Bayesian ANalysis of Compositional...

In banocc: Bayesian ANalysis Of Compositional Covariance

Description

BAnOCC is a package for inferring correlations between features in compositional data, where each sample sums to one. It provides one object, banocc_model and one function, run_banocc

banocc objects

banocc_model has the stan model code to be compiled using rstan::stan.

banocc functions

run_banocc takes a compiled model, and returns the 'stanfit' object resulting from a call to rstan::sampling

get_banocc_output takes a 'stanfit' object or the output of run_banocc and returns a list with the posterior median and credible interval estimates

banocc documentation built on Nov. 8, 2020, 8:08 p.m.