TReNA: Fit transcriptional regulatory networks using gene expression, priors, machine learning

Methods for reconstructing transcriptional regulatory networks, especially in species for which genome-wide TF binding site information is available.

Package details

AuthorSeth Ament <seth.ament@systemsbiology.org>, Paul Shannon <pshannon@systemsbioloyg.org>, Matthew Richards <mrichard@systemsbiology.org>
Bioconductor views FeatureExtraction GeneExpression GeneRegulation NetworkInference Regression SystemsBiology Transcription
MaintainerMatthew Richards <mrichard@systemsbiology.org>
LicenseGPL-3
Version0.99.10
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TReNA")

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TReNA documentation built on Nov. 17, 2017, 12:35 p.m.