mergeColData: Take a MultiAssayExperiment and include curated variables
In TCGAutils: TCGA utility functions for data management
Description
Usage
Arguments
Value
Examples
View source: R/simplifyColData.R
Description
This function works on the colData of a
MultiAssayExperiment object to merge curated variable
columns or other clinical variables that would like to be added. It is
recommended that the user run the scripts in the
MultiAssayExperiment-TCGA repository that build the "enhanced" type
of data but not necessary if using different clinical data.
Please see the repository's README for more information.
Usage
1
mergeColData(MultiAssayExperiment, colData)
Arguments
MultiAssayExperiment
A MultiAssayExperiment object
colData
A DataFrame or data.frame to merge with
clinical data in the MultiAssayExperiment object
Value
A MultiAssayExperiment object
Examples
1
2
3
library(MultiAssayExperiment)
mergeColData(MultiAssayExperiment(), S4Vectors::DataFrame())
TCGAutils documentation built on April 17, 2021, 6:04 p.m.
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Description Usage Arguments Value Examples
View source: R/simplifyColData.R
Description
This function works on the colData of a
MultiAssayExperiment object to merge curated variable
columns or other clinical variables that would like to be added. It is
recommended that the user run the scripts in the
MultiAssayExperiment-TCGA repository that build the "enhanced" type
of data but not necessary if using different clinical data.
Please see the repository's README for more information.
Usage
1 | mergeColData(MultiAssayExperiment, colData)
|
Arguments
MultiAssayExperiment |
A MultiAssayExperiment object |
colData |
A |
Value
A MultiAssayExperiment object
Examples
1 2 3 | library(MultiAssayExperiment)
mergeColData(MultiAssayExperiment(), S4Vectors::DataFrame())
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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