example.seqfile.Rdata: Example SeqSQC file used in vignette.
In SeqSQC: A bioconductor package for sample quality check with next generation sequencing data
Description
The SeqSQC object is a list of two objects. The first object
gdsfile is the filepath of the "example.gds" file which
stores the genotype and meta info of the example data merged with
the benchmark data. The second object QCresult contains the
data dimensions (# of samples and variants), sample annotation, and
QC results for sample missing rate, sex check, inbreeding outlier
check, IBD check, and population outlier check.
Author(s)
Qian Liu qliu7@buffalo.edu
SeqSQC documentation built on Nov. 8, 2020, 5:03 p.m.
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Description
The SeqSQC object is a list of two objects. The first object
gdsfile is the filepath of the "example.gds" file which
stores the genotype and meta info of the example data merged with
the benchmark data. The second object QCresult contains the
data dimensions (# of samples and variants), sample annotation, and
QC results for sample missing rate, sex check, inbreeding outlier
check, IBD check, and population outlier check.
Author(s)
Qian Liu qliu7@buffalo.edu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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