nestNodes: Nest nodes to containers.
In RedeR: Interactive visualization and manipulation of nested networks

Description Usage Arguments Details Value Note Author(s) See Also Examples

Method to nest nodes in an active RedeR session.

1	nestNodes(obj, nodes, ...)

`obj`	Object of RedPort Class.
`nodes`	<array of strings>
`...`	Additional arguments passed to RedeR application.

Additional arguments:

nestImage: Status of the container on the screen: <'plain'>, <'transparent'>, or <'hide'> (default = 'plain').
isAssign: Logical value, whether to assign the container name to the nested nodes (default = TRUE).
isAnchor: Logical value, whether is to anchor the container in dynamic layouts (default = FALSE).
gscale: Expansion factor of the nest area related to a parent nest – or related to the app panel (default = 40) <numerics>.
gcoord: Sets the nest c(x,y) center related to the parent center. Coords between 0 and 100 are set to the inner area (default = NULL) <numeric vector>.
parent: Nest ID of a parent nest. Must be used with 'isAssign=TRUE' (default = NULL).
gatt: A list with graph attributes. See nest attribute syntax in addGraph
theme: Some pre-defined nest attributes. Options: 'tm0','tm1','tm2','tm3','tm4','tm5', 'tm6' <string>. Alternatively, it can be a list with customized attributes.

Add/change graph objects.

Prior calling this method invoke RedeR application via XML-RPC server (i.e. 'calld').

Mauro Castro

RedPort

# Initialize igraph
library(igraph)

el<-matrix(c('n1','n2','n3','n4'), ncol=2, byrow=TRUE)
g <- graph.edgelist(el)

## Not run: 

  rdp <- RedPort() 
  calld(rdp)
  addGraph( rdp, g, layout.kamada.kawai(g) )
  nestNodes( rdp, c('n1','n2') )
  nestNodes( rdp, c("n3","n4") ) 

## End(Not run)