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README.md
In RcisTarget: RcisTarget: Identify transcription factor binding motifs enriched on a gene list
RcisTarget
RcisTarget is an R-package to identify transcription factor (TF) binding motifs over-represented on a gene list.
Availability:
-
The newest stable version of RcisTarget is available in Bioconductor.
The package also contains a tutorial (vignette) with information on how to run RcisTarget and how to interprete its results.
-
This Github repository is meant mostly for development. "Use at your own risk" :-). Developers are welcome to contribute.
Databases:
The databases required to run (R)cisTarget are available at https://resources.aertslab.org/cistarget/ (see the vignette for details). Alternative mirror: https://resources-mirror.aertslab.org/cistarget/
Try the RcisTarget package in your browser
Any scripts or data that you put into this service are public.
RcisTarget documentation built on Nov. 8, 2020, 6:57 p.m.
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RcisTarget
RcisTarget is an R-package to identify transcription factor (TF) binding motifs over-represented on a gene list.
Availability:
-
The newest stable version of RcisTarget is available in Bioconductor. The package also contains a tutorial (vignette) with information on how to run RcisTarget and how to interprete its results.
-
This Github repository is meant mostly for development. "Use at your own risk" :-). Developers are welcome to contribute.
Databases:
The databases required to run (R)cisTarget are available at https://resources.aertslab.org/cistarget/ (see the vignette for details). Alternative mirror: https://resources-mirror.aertslab.org/cistarget/
Try the RcisTarget package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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