multi-utils: Multi call processing
In Rariant: Identification and Assessment of Single Nucleotide Variants through Shifts in Non-Consensus Base Call Frequencies
Description
Utilities for processing matched calls from multipe samples.
Usage
1
2
3
4
5
6
findCalls(x, ..., minCount = 1)
filterCalls(x, ..., minCount = 1)
mergeCalls(x)
updateCalls(x, ...)
Arguments
x
GenomicRangesList with calls from multiple samples.
...
Additional arguments.
minCount
For finding and filtering, for how many samples must
the condition '...' hold true for a site to be returned?
Rariant documentation built on Nov. 8, 2020, 6:56 p.m.
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Description
Utilities for processing matched calls from multipe samples.
Usage
1 2 3 4 5 6 | findCalls(x, ..., minCount = 1)
filterCalls(x, ..., minCount = 1)
mergeCalls(x)
updateCalls(x, ...)
|
Arguments
x |
GenomicRangesList with calls from multiple samples. |
... |
Additional arguments. |
minCount |
For finding and filtering, for how many samples must the condition '...' hold true for a site to be returned? |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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