enrichmentPValue_R_Backend: R backend for enrichmentPValue calculation

In RVS: Computes estimates of the probability of related individuals sharing a rare variant

Description

R backend for enrichmentPValue calculation

Usage

enrichmentPValue_R_Backend(
  snpMat,
  famIds,
  sharingProbs,
  minorAllele,
  threshold = 0
)

Arguments

snpMat	SnpMatrix
famIds	family ids corresponding to rows of the snpMap
sharingProbs	vector of sharing probabilites, must be a named vector with famid's for each probability
minorAllele	which variant value to count as the minor allele
threshold	minimum p-value threshold passed to multipleFamilyPValue

Value

p-value

RVS documentation built on Nov. 8, 2020, 6:57 p.m.