Nothing
inittime <- Sys.time()
cat(paste("\n Starting test.Z-magellan at", date(), "\n"))
## About this test. This ain't that important and it is rather fragile. I
## added it as I made minor changes to the MAGELLAN sources and wanted to
## make sure output was identical. But compiler differences apparently
## introduce some strange minor numerical differences.
RNGkind("Mersenne-Twister")
RNGversion("3.6.3")
test_that("Same output from magellan as before changing their C code", {
set.seed(1)
r9 <- rfitness(8)
options(digits = 5)
cat("\n r9 \n")
print(summary(r9[, "Fitness"]))
print(var(r9[, "Fitness"]))
cat("\n 10 runif \n")
print(runif(10))
## Anything that simulates from Magellan will not respect
## R's seed
s9s <- Magellan_stats(r9, verbose = TRUE)
s9l <- Magellan_stats(r9, short = FALSE, verbose = TRUE)
s9s_compare <- structure(c(ngeno = 256, npeaks = 23, nsinks = 25, gamma = 0.094, gamma. = 0.089,
r.s = 1.814, nchains = 12, nsteps = 26, nori = 21, depth = 2,
magn = 0.361, sign = 0.339, rsign = 0.272, f.1. = 0.382, X.2. = 0.094,
f.3.. = 0.524, mode_f = 1, outD_m = 3.78, outD_v = 5.953, steps_m = 2.561,
reach_m = 31.858, fitG_m = 136.215, opt_i = 7, mProbOpt_0 = 0.019,
opt_i.1 = 17, mProbOpt_1 = 0.022, opt_i.2 = 29, mProbOpt_2 = 0.028,
opt_i.3 = 32, mProbOpt_3 = 0.051, opt_i.4 = 35, mProbOpt_4 = 0.017,
opt_i.5 = 59, mProbOpt_5 = 0.015, opt_i.6 = 66, mProbOpt_6 = 0.129,
opt_i.7 = 75, mProbOpt_7 = 0.166, opt_i.8 = 76, mProbOpt_8 = 0.023,
opt_i.9 = 80, mProbOpt_9 = 0.051, opt_i.10 = 100, mProbOpt_10 = 0.032,
opt_i.11 = 109, mProbOpt_11 = 0.047, opt_i.12 = 117, mProbOpt_12 = 0.016,
opt_i.13 = 118, mProbOpt_13 = 0.104, opt_i.14 = 137, mProbOpt_14 = 0.018,
opt_i.15 = 172, mProbOpt_15 = 0.016, opt_i.16 = 175, mProbOpt_16 = 0.009,
opt_i.17 = 186, mProbOpt_17 = 0.008, opt_i.18 = 213, mProbOpt_18 = 0.018,
opt_i.19 = 230, mProbOpt_19 = 0.152, opt_i.20 = 232, mProbOpt_20 = 0.025,
opt_i.21 = 242, mProbOpt_21 = 0.014, opt_i.22 = 251, mProbOpt_22 = 0.021
))
cat("\n s9s[21] and s9s_compare[21]\n")
print(s9s[21])
print(s9s_compare[21])
cat("\n where they differ\n")
print(which(s9s!=s9s_compare))
cat("\n name of binary\n")
print(OncoSimulR:::fl_statistics_binary())
cat("\n s9s\n")
print(s9s)
cat("\n s9s_compare\n")
print(s9s_compare)
s9l_compare <- structure(c("/* FL name */", " coco", "", "/* Peaks/Sinks */", " #genotypes: 256",
" #peaks: 23", " #sinks: 25", "", "/* Epistasis types */",
" none: 0.027", " magnitude: 0.361", " sign: 0.339",
" reciprocal: 0.272", "", "/* Roughness / Slope */", " r/s: 1.814229",
"", "", "/*****************/", "/**** Gamma ****/", "/*****************/",
"", "/* Gamma Global */", " gamma[0]:\t1", " gamma[1]:\t0.093665",
" gamma[2]:\t0.177807", " gamma[3]:\t0.076915", " gamma[4]:\t0.177604",
" gamma[5]:\t0.056439", " gamma[6]:\t0.170016", " gamma[7]:\t0.028146",
"", "", "/* Gamma Locus */", "", " Gamma(1->):\t0.043746",
" Gamma(2->):\t0.077618", " Gamma(3->):\t0.267865", " Gamma(4->):\t0.001534",
" Gamma(5->):\t0.221124", " Gamma(6->):\t0.047696", " Gamma(7->):\t0.094423",
" Gamma(8->):\t-0.012033", "", " Gamma(->1):\t0.048964",
" Gamma(->2):\t0.101488", " Gamma(->3):\t0.120639", " Gamma(->4):\t0.098386",
" Gamma(->5):\t0.165804", " Gamma(->6):\t0.042961", " Gamma(->7):\t0.101460",
" Gamma(->8):\t0.078489", "", " Gamma(1->1):\t1.000000",
" Gamma(1->2):\t-0.019557", " Gamma(1->3):\t0.150111", " Gamma(1->4):\t0.031791",
" Gamma(1->5):\t0.228112", " Gamma(1->6):\t-0.023370", " Gamma(1->7):\t-0.078437",
" Gamma(1->8):\t0.047110", "", " Gamma(2->1):\t-0.038198",
" Gamma(2->2):\t1.000000", " Gamma(2->3):\t0.085122", " Gamma(2->4):\t0.046205",
" Gamma(2->5):\t0.128091", " Gamma(2->6):\t-0.008970", " Gamma(2->7):\t0.192830",
" Gamma(2->8):\t0.139384", "", " Gamma(3->1):\t0.280729",
" Gamma(3->2):\t0.239629", " Gamma(3->3):\t1.000000", " Gamma(3->4):\t0.337495",
" Gamma(3->5):\t0.250181", " Gamma(3->6):\t0.223569", " Gamma(3->7):\t0.259066",
" Gamma(3->8):\t0.276613", "", " Gamma(4->1):\t-0.052958",
" Gamma(4->2):\t-0.018657", " Gamma(4->3):\t0.148666", " Gamma(4->4):\t1.000000",
" Gamma(4->5):\t0.147806", " Gamma(4->6):\t-0.123604", " Gamma(4->7):\t0.025148",
" Gamma(4->8):\t-0.078286", "", " Gamma(5->1):\t0.276746",
" Gamma(5->2):\t0.197695", " Gamma(5->3):\t0.169838", " Gamma(5->4):\t0.265767",
" Gamma(5->5):\t1.000000", " Gamma(5->6):\t0.244772", " Gamma(5->7):\t0.298130",
" Gamma(5->8):\t0.093769", "", " Gamma(6->1):\t-0.014072",
" Gamma(6->2):\t0.018148", " Gamma(6->3):\t0.090907", " Gamma(6->4):\t-0.023783",
" Gamma(6->5):\t0.201311", " Gamma(6->6):\t1.000000", " Gamma(6->7):\t0.051445",
" Gamma(6->8):\t0.034108", "", " Gamma(7->1):\t-0.080636",
" Gamma(7->2):\t0.205706", " Gamma(7->3):\t0.122730", " Gamma(7->4):\t0.101782",
" Gamma(7->5):\t0.249407", " Gamma(7->6):\t0.040796", " Gamma(7->7):\t1.000000",
" Gamma(7->8):\t0.036728", "", " Gamma(8->1):\t-0.028865",
" Gamma(8->2):\t0.087450", " Gamma(8->3):\t0.077099", " Gamma(8->4):\t-0.070553",
" Gamma(8->5):\t-0.044282", " Gamma(8->6):\t-0.052466", " Gamma(8->7):\t-0.037958",
" Gamma(8->8):\t1.000000", "", "", "", "/* Gamma Allele Pairs */",
"", " Gamma(1->1):\t1.000000", " Gamma(1->2):\t-0.019557",
" Gamma(1->3):\t0.150111", " Gamma(1->4):\t0.031791", " Gamma(1->5):\t0.228112",
" Gamma(1->6):\t-0.023370", " Gamma(1->7):\t-0.078437", " Gamma(1->8):\t0.047110",
"", " Gamma(2->1):\t-0.038198", " Gamma(2->2):\t1.000000",
" Gamma(2->3):\t0.085122", " Gamma(2->4):\t0.046205", " Gamma(2->5):\t0.128091",
" Gamma(2->6):\t-0.008970", " Gamma(2->7):\t0.192830", " Gamma(2->8):\t0.139384",
"", " Gamma(3->1):\t0.280729", " Gamma(3->2):\t0.239629",
" Gamma(3->3):\t1.000000", " Gamma(3->4):\t0.337495", " Gamma(3->5):\t0.250181",
" Gamma(3->6):\t0.223569", " Gamma(3->7):\t0.259066", " Gamma(3->8):\t0.276613",
"", " Gamma(4->1):\t-0.052958", " Gamma(4->2):\t-0.018657",
" Gamma(4->3):\t0.148666", " Gamma(4->4):\t1.000000", " Gamma(4->5):\t0.147806",
" Gamma(4->6):\t-0.123604", " Gamma(4->7):\t0.025148", " Gamma(4->8):\t-0.078286",
"", " Gamma(5->1):\t0.276746", " Gamma(5->2):\t0.197695",
" Gamma(5->3):\t0.169838", " Gamma(5->4):\t0.265767", " Gamma(5->5):\t1.000000",
" Gamma(5->6):\t0.244772", " Gamma(5->7):\t0.298130", " Gamma(5->8):\t0.093769",
"", " Gamma(6->1):\t-0.014072", " Gamma(6->2):\t0.018148",
" Gamma(6->3):\t0.090907", " Gamma(6->4):\t-0.023783", " Gamma(6->5):\t0.201311",
" Gamma(6->6):\t1.000000", " Gamma(6->7):\t0.051445", " Gamma(6->8):\t0.034108",
"", " Gamma(7->1):\t-0.080636", " Gamma(7->2):\t0.205706",
" Gamma(7->3):\t0.122730", " Gamma(7->4):\t0.101782", " Gamma(7->5):\t0.249407",
" Gamma(7->6):\t0.040796", " Gamma(7->7):\t1.000000", " Gamma(7->8):\t0.036728",
"", " Gamma(8->1):\t-0.028865", " Gamma(8->2):\t0.087450",
" Gamma(8->3):\t0.077099", " Gamma(8->4):\t-0.070553", " Gamma(8->5):\t-0.044282",
" Gamma(8->6):\t-0.052466", " Gamma(8->7):\t-0.037958", " Gamma(8->8):\t1.000000",
"", "", " Gamma(->1):\t0.048964", " Gamma(->2):\t0.101488",
" Gamma(->3):\t0.120639", " Gamma(->4):\t0.098386", " Gamma(->5):\t0.165804",
" Gamma(->6):\t0.042961", " Gamma(->7):\t0.101460", " Gamma(->8):\t0.078489",
"", " Gamma(1->):\t0.043746", " Gamma(2->):\t0.077618", " Gamma(3->):\t0.267865",
" Gamma(4->):\t0.001534", " Gamma(5->):\t0.221124", " Gamma(6->):\t0.047696",
" Gamma(7->):\t0.094423", " Gamma(8->):\t-0.012033", "",
"", "/* Gamma Allele */", "", " Gamma(1->1):\t1.000000", " Gamma(1->2):\t1.000000",
" Gamma(1->3):\t-0.019557", " Gamma(1->4):\t-0.019557", " Gamma(1->5):\t0.150111",
" Gamma(1->6):\t0.150111", " Gamma(1->7):\t0.031791", " Gamma(1->8):\t0.031791",
" Gamma(1->9):\t0.228112", " Gamma(1->10):\t0.228112", " Gamma(1->11):\t-0.023370",
" Gamma(1->12):\t-0.023370", " Gamma(1->13):\t-0.078437",
" Gamma(1->14):\t-0.078437", " Gamma(1->15):\t0.047110",
" Gamma(1->16):\t0.047110", "", " Gamma(2->1):\t1.000000",
" Gamma(2->2):\t1.000000", " Gamma(2->3):\t-0.019557", " Gamma(2->4):\t-0.019557",
" Gamma(2->5):\t0.150111", " Gamma(2->6):\t0.150111", " Gamma(2->7):\t0.031791",
" Gamma(2->8):\t0.031791", " Gamma(2->9):\t0.228112", " Gamma(2->10):\t0.228112",
" Gamma(2->11):\t-0.023370", " Gamma(2->12):\t-0.023370",
" Gamma(2->13):\t-0.078437", " Gamma(2->14):\t-0.078437",
" Gamma(2->15):\t0.047110", " Gamma(2->16):\t0.047110", "",
" Gamma(3->1):\t-0.038198", " Gamma(3->2):\t-0.038198", " Gamma(3->3):\t1.000000",
" Gamma(3->4):\t1.000000", " Gamma(3->5):\t0.085122", " Gamma(3->6):\t0.085122",
" Gamma(3->7):\t0.046205", " Gamma(3->8):\t0.046205", " Gamma(3->9):\t0.128091",
" Gamma(3->10):\t0.128091", " Gamma(3->11):\t-0.008970",
" Gamma(3->12):\t-0.008970", " Gamma(3->13):\t0.192830",
" Gamma(3->14):\t0.192830", " Gamma(3->15):\t0.139384", " Gamma(3->16):\t0.139384",
"", " Gamma(4->1):\t-0.038198", " Gamma(4->2):\t-0.038198",
" Gamma(4->3):\t1.000000", " Gamma(4->4):\t1.000000", " Gamma(4->5):\t0.085122",
" Gamma(4->6):\t0.085122", " Gamma(4->7):\t0.046205", " Gamma(4->8):\t0.046205",
" Gamma(4->9):\t0.128091", " Gamma(4->10):\t0.128091", " Gamma(4->11):\t-0.008970",
" Gamma(4->12):\t-0.008970", " Gamma(4->13):\t0.192830",
" Gamma(4->14):\t0.192830", " Gamma(4->15):\t0.139384", " Gamma(4->16):\t0.139384",
"", " Gamma(5->1):\t0.280729", " Gamma(5->2):\t0.280729",
" Gamma(5->3):\t0.239629", " Gamma(5->4):\t0.239629", " Gamma(5->5):\t1.000000",
" Gamma(5->6):\t1.000000", " Gamma(5->7):\t0.337495", " Gamma(5->8):\t0.337495",
" Gamma(5->9):\t0.250181", " Gamma(5->10):\t0.250181", " Gamma(5->11):\t0.223569",
" Gamma(5->12):\t0.223569", " Gamma(5->13):\t0.259066", " Gamma(5->14):\t0.259066",
" Gamma(5->15):\t0.276613", " Gamma(5->16):\t0.276613", "",
" Gamma(6->1):\t0.280729", " Gamma(6->2):\t0.280729", " Gamma(6->3):\t0.239629",
" Gamma(6->4):\t0.239629", " Gamma(6->5):\t1.000000", " Gamma(6->6):\t1.000000",
" Gamma(6->7):\t0.337495", " Gamma(6->8):\t0.337495", " Gamma(6->9):\t0.250181",
" Gamma(6->10):\t0.250181", " Gamma(6->11):\t0.223569", " Gamma(6->12):\t0.223569",
" Gamma(6->13):\t0.259066", " Gamma(6->14):\t0.259066", " Gamma(6->15):\t0.276613",
" Gamma(6->16):\t0.276613", "", " Gamma(7->1):\t-0.052958",
" Gamma(7->2):\t-0.052958", " Gamma(7->3):\t-0.018657", " Gamma(7->4):\t-0.018657",
" Gamma(7->5):\t0.148666", " Gamma(7->6):\t0.148666", " Gamma(7->7):\t1.000000",
" Gamma(7->8):\t1.000000", " Gamma(7->9):\t0.147806", " Gamma(7->10):\t0.147806",
" Gamma(7->11):\t-0.123604", " Gamma(7->12):\t-0.123604",
" Gamma(7->13):\t0.025148", " Gamma(7->14):\t0.025148", " Gamma(7->15):\t-0.078286",
" Gamma(7->16):\t-0.078286", "", " Gamma(8->1):\t-0.052958",
" Gamma(8->2):\t-0.052958", " Gamma(8->3):\t-0.018657", " Gamma(8->4):\t-0.018657",
" Gamma(8->5):\t0.148666", " Gamma(8->6):\t0.148666", " Gamma(8->7):\t1.000000",
" Gamma(8->8):\t1.000000", " Gamma(8->9):\t0.147806", " Gamma(8->10):\t0.147806",
" Gamma(8->11):\t-0.123604", " Gamma(8->12):\t-0.123604",
" Gamma(8->13):\t0.025148", " Gamma(8->14):\t0.025148", " Gamma(8->15):\t-0.078286",
" Gamma(8->16):\t-0.078286", "", " Gamma(9->1):\t0.276746",
" Gamma(9->2):\t0.276746", " Gamma(9->3):\t0.197695", " Gamma(9->4):\t0.197695",
" Gamma(9->5):\t0.169838", " Gamma(9->6):\t0.169838", " Gamma(9->7):\t0.265767",
" Gamma(9->8):\t0.265767", " Gamma(9->9):\t1.000000", " Gamma(9->10):\t1.000000",
" Gamma(9->11):\t0.244772", " Gamma(9->12):\t0.244772", " Gamma(9->13):\t0.298130",
" Gamma(9->14):\t0.298130", " Gamma(9->15):\t0.093769", " Gamma(9->16):\t0.093769",
"", " Gamma(10->1):\t0.276746", " Gamma(10->2):\t0.276746",
" Gamma(10->3):\t0.197695", " Gamma(10->4):\t0.197695", " Gamma(10->5):\t0.169838",
" Gamma(10->6):\t0.169838", " Gamma(10->7):\t0.265767", " Gamma(10->8):\t0.265767",
" Gamma(10->9):\t1.000000", " Gamma(10->10):\t1.000000",
" Gamma(10->11):\t0.244772", " Gamma(10->12):\t0.244772",
" Gamma(10->13):\t0.298130", " Gamma(10->14):\t0.298130",
" Gamma(10->15):\t0.093769", " Gamma(10->16):\t0.093769",
"", " Gamma(11->1):\t-0.014072", " Gamma(11->2):\t-0.014072",
" Gamma(11->3):\t0.018148", " Gamma(11->4):\t0.018148", " Gamma(11->5):\t0.090907",
" Gamma(11->6):\t0.090907", " Gamma(11->7):\t-0.023783",
" Gamma(11->8):\t-0.023783", " Gamma(11->9):\t0.201311",
" Gamma(11->10):\t0.201311", " Gamma(11->11):\t1.000000",
" Gamma(11->12):\t1.000000", " Gamma(11->13):\t0.051445",
" Gamma(11->14):\t0.051445", " Gamma(11->15):\t0.034108",
" Gamma(11->16):\t0.034108", "", " Gamma(12->1):\t-0.014072",
" Gamma(12->2):\t-0.014072", " Gamma(12->3):\t0.018148",
" Gamma(12->4):\t0.018148", " Gamma(12->5):\t0.090907", " Gamma(12->6):\t0.090907",
" Gamma(12->7):\t-0.023783", " Gamma(12->8):\t-0.023783",
" Gamma(12->9):\t0.201311", " Gamma(12->10):\t0.201311",
" Gamma(12->11):\t1.000000", " Gamma(12->12):\t1.000000",
" Gamma(12->13):\t0.051445", " Gamma(12->14):\t0.051445",
" Gamma(12->15):\t0.034108", " Gamma(12->16):\t0.034108",
"", " Gamma(13->1):\t-0.080636", " Gamma(13->2):\t-0.080636",
" Gamma(13->3):\t0.205706", " Gamma(13->4):\t0.205706", " Gamma(13->5):\t0.122730",
" Gamma(13->6):\t0.122730", " Gamma(13->7):\t0.101782", " Gamma(13->8):\t0.101782",
" Gamma(13->9):\t0.249407", " Gamma(13->10):\t0.249407",
" Gamma(13->11):\t0.040796", " Gamma(13->12):\t0.040796",
" Gamma(13->13):\t1.000000", " Gamma(13->14):\t1.000000",
" Gamma(13->15):\t0.036728", " Gamma(13->16):\t0.036728",
"", " Gamma(14->1):\t-0.080636", " Gamma(14->2):\t-0.080636",
" Gamma(14->3):\t0.205706", " Gamma(14->4):\t0.205706", " Gamma(14->5):\t0.122730",
" Gamma(14->6):\t0.122730", " Gamma(14->7):\t0.101782", " Gamma(14->8):\t0.101782",
" Gamma(14->9):\t0.249407", " Gamma(14->10):\t0.249407",
" Gamma(14->11):\t0.040796", " Gamma(14->12):\t0.040796",
" Gamma(14->13):\t1.000000", " Gamma(14->14):\t1.000000",
" Gamma(14->15):\t0.036728", " Gamma(14->16):\t0.036728",
"", " Gamma(15->1):\t-0.028865", " Gamma(15->2):\t-0.028865",
" Gamma(15->3):\t0.087450", " Gamma(15->4):\t0.087450", " Gamma(15->5):\t0.077099",
" Gamma(15->6):\t0.077099", " Gamma(15->7):\t-0.070553",
" Gamma(15->8):\t-0.070553", " Gamma(15->9):\t-0.044282",
" Gamma(15->10):\t-0.044282", " Gamma(15->11):\t-0.052466",
" Gamma(15->12):\t-0.052466", " Gamma(15->13):\t-0.037958",
" Gamma(15->14):\t-0.037958", " Gamma(15->15):\t1.000000",
" Gamma(15->16):\t1.000000", "", " Gamma(16->1):\t-0.028865",
" Gamma(16->2):\t-0.028865", " Gamma(16->3):\t0.087450",
" Gamma(16->4):\t0.087450", " Gamma(16->5):\t0.077099", " Gamma(16->6):\t0.077099",
" Gamma(16->7):\t-0.070553", " Gamma(16->8):\t-0.070553",
" Gamma(16->9):\t-0.044282", " Gamma(16->10):\t-0.044282",
" Gamma(16->11):\t-0.052466", " Gamma(16->12):\t-0.052466",
" Gamma(16->13):\t-0.037958", " Gamma(16->14):\t-0.037958",
" Gamma(16->15):\t1.000000", " Gamma(16->16):\t1.000000",
"", "", " Gamma(->1):\t0.048964", " Gamma(->2):\t0.048964",
" Gamma(->3):\t0.101488", " Gamma(->4):\t0.101488", " Gamma(->5):\t0.120639",
" Gamma(->6):\t0.120639", " Gamma(->7):\t0.098386", " Gamma(->8):\t0.098386",
" Gamma(->9):\t0.165804", " Gamma(->10):\t0.165804", " Gamma(->11):\t0.042961",
" Gamma(->12):\t0.042961", " Gamma(->13):\t0.101460", " Gamma(->14):\t0.101460",
" Gamma(->15):\t0.078489", " Gamma(->16):\t0.078489", "",
" Gamma(1->):\t0.043746", " Gamma(2->):\t0.043746", " Gamma(3->):\t0.077618",
" Gamma(4->):\t0.077618", " Gamma(5->):\t0.267865", " Gamma(6->):\t0.267865",
" Gamma(7->):\t0.001534", " Gamma(8->):\t0.001534", " Gamma(9->):\t0.221124",
" Gamma(10->):\t0.221124", " Gamma(11->):\t0.047696", " Gamma(12->):\t0.047696",
" Gamma(13->):\t0.094423", " Gamma(14->):\t0.094423", " Gamma(15->):\t-0.012033",
" Gamma(16->):\t-0.012033", "", "", "/* Fourier Decomposition */",
" o\tfraction", " 1\t0.382", " 2\t0.094", " 3\t0.125",
" 4\t0.167", " 5\t0.132", " 6\t0.066", " 7\t0.012", " 8\t0.022",
"", "/* Fourier Fraction epistasis */", "\t0.618", "", "/* Out-degree distribution */",
" deg # fract", "d: 0 23 0.090", "d: 1 26 0.102", "d: 2 25 0.098",
"d: 3 40 0.156", "d: 4 37 0.145", "d: 5 28 0.109", "d: 6 24 0.094",
"d: 7 28 0.109", "d: 8 25 0.098", "Mean(OutDegree): 4.000000",
"Stdev(OutDegree): 5.952941", "", "/* Accessible genotypes from g after (s steps) */",
" g\ts1 s2 s3 ...", "----\t----------------", " 0\t 1 1 3 4 5 6 6 ",
" 1\t 1 6 12 19 24 24 23 22 21 21 ", " 2\t 1 7 17 39 59 79 83 82 85 81 80 77 76 74 74 ",
" 3\t 1 1 1 ", " 4\t 1 7 13 23 36 44 42 41 39 38 38 ",
" 5\t 1 4 7 8 9 10 10 10 ", " 6\t 1 1 ",
" 7\t 1 8 18 34 48 57 66 72 76 74 69 67 66 66 ",
" 8\t 1 3 4 5 6 6 ", " 9\t 1 4 9 12 15 17 17 17 16 16 ",
" 10\t 1 5 15 27 41 54 63 70 65 65 64 65 65 65 ",
" 11\t 1 7 17 35 52 69 81 78 83 78 72 72 72 72 ",
" 12\t 1 5 13 25 32 33 35 33 30 29 28 28 ",
" 13\t 1 2 3 4 5 5 5 5 ", " 14\t 1 6 12 19 29 36 37 37 35 32 31 30 30 ",
" 15\t 1 6 13 20 29 36 42 42 42 40 37 37 ",
" 16\t 1 5 11 19 24 30 31 33 33 31 30 30 ",
" 17\t 1 8 22 34 48 53 59 66 64 63 61 62 62 62 ",
" 18\t 1 5 18 32 54 64 68 72 74 72 68 67 67 ",
" 19\t 1 6 13 25 30 35 45 53 52 52 52 51 51 ",
" 20\t 1 3 6 7 8 8 8 ", " 21\t 1 3 4 5 5 5 ",
" 22\t 1 7 19 44 62 80 83 85 86 83 79 79 79 ",
" 23\t 1 2 4 5 6 6 6 ", " 24\t 1 1 ",
" 25\t 1 4 6 9 11 13 13 11 10 10 ", " 26\t 1 6 14 25 35 49 58 60 59 58 59 59 59 ",
" 27\t 1 4 11 16 29 38 44 47 47 43 40 40 40 ",
" 28\t 1 3 3 3 ", " 29\t 1 8 21 29 35 31 28 28 ",
" 30\t 1 1 ", " 31\t 1 5 5 8 7 7 7 7 ",
" 32\t 1 8 20 39 49 59 58 59 55 54 53 52 52 ",
" 33\t 1 3 6 8 9 10 10 10 ", " 34\t 1 4 15 23 29 31 27 25 24 22 21 21 ",
" 35\t 1 8 16 33 41 45 46 47 45 44 44 ",
" 36\t 1 5 10 15 20 18 17 17 17 ", " 37\t 1 2 3 3 3 3 ",
" 38\t 1 5 9 12 12 14 13 12 12 ", " 39\t 1 4 7 9 11 11 10 9 9 ",
" 40\t 1 2 4 5 5 ", " 41\t 1 3 5 8 9 9 8 8 ",
" 42\t 1 5 6 8 9 9 9 ", " 43\t 1 4 11 18 26 24 22 20 18 17 17 ",
" 44\t 1 4 8 12 12 12 12 ", " 45\t 1 2 3 4 4 4 4 ",
" 46\t 1 3 5 5 5 5 ", " 47\t 1 3 6 9 10 10 9 9 ",
" 48\t 1 4 7 10 10 9 9 ", " 49\t 1 2 3 3 3 3 ",
" 50\t 1 5 9 17 21 21 19 19 18 18 ", " 51\t 1 2 3 4 4 4 4 ",
" 52\t 1 1 1 1 ", " 53\t 1 2 2 2 2 ",
" 54\t 1 4 10 14 13 12 14 13 12 12 ", " 55\t 1 1 1 ",
" 56\t 1 2 2 2 ", " 57\t 1 4 8 10 12 12 10 9 9 ",
" 58\t 1 2 4 4 4 4 ", " 59\t 1 8 20 39 54 58 64 62 57 55 54 54 54 ",
" 60\t 1 1 1 ", " 61\t 1 6 12 14 14 11 12 12 ",
" 62\t 1 3 3 3 3 ", " 63\t 1 1 1 1 ",
" 64\t 1 1 1 3 4 5 6 6 ", " 65\t 1 6 20 32 49 62 67 65 63 62 61 61 ",
" 66\t 1 8 24 46 78 105 120 123 121 120 116 113 111 110 110 ",
" 67\t 1 6 17 42 60 79 94 95 95 87 82 76 75 74 74 ",
" 68\t 1 5 15 22 34 44 53 50 48 47 46 46 ",
" 69\t 1 4 7 10 13 19 20 22 22 22 ", " 70\t 1 5 11 27 41 56 66 76 80 80 78 76 76 ",
" 71\t 1 4 14 26 36 44 53 60 62 59 59 58 58 ",
" 72\t 1 6 17 29 47 65 77 89 84 86 81 77 74 72 72 ",
" 73\t 1 7 19 40 57 75 91 96 99 96 96 93 92 92 ",
" 74\t 1 5 13 27 42 56 72 76 81 74 69 65 64 64 64 ",
" 75\t 1 8 27 55 88 118 133 135 128 129 127 121 119 117 117 ",
" 76\t 1 8 21 40 62 81 90 96 103 98 100 96 93 93 ",
" 77\t 1 1 ", " 78\t 1 1 1 ", " 79\t 1 3 3 3 ",
" 80\t 1 8 24 42 70 84 98 104 102 98 95 90 89 89 ",
" 81\t 1 2 2 ", " 82\t 1 5 12 33 50 66 79 80 82 77 74 71 70 70 ",
" 83\t 1 3 9 14 22 33 43 46 48 47 47 47 ",
" 84\t 1 5 8 14 15 20 21 19 19 18 18 ",
" 85\t 1 1 ", " 86\t 1 7 24 48 78 97 105 107 101 96 92 88 87 87 ",
" 87\t 1 6 9 15 18 25 36 45 47 48 47 47 47 ",
" 88\t 1 5 5 5 5 5 ", " 89\t 1 1 ", " 90\t 1 5 15 24 37 49 55 57 57 58 58 58 ",
" 91\t 1 4 7 16 27 38 43 47 43 40 40 40 ",
" 92\t 1 1 3 3 3 ", " 93\t 1 6 8 16 19 19 19 18 18 ",
" 94\t 1 5 8 17 24 29 30 27 25 25 ", " 95\t 1 1 ",
" 96\t 1 3 7 10 22 26 33 34 35 33 32 32 ",
" 97\t 1 7 12 25 33 44 46 48 46 45 45 ",
" 98\t 1 7 13 25 35 48 50 51 52 50 48 47 47 ",
" 99\t 1 1 4 6 9 11 16 15 17 17 ", " 100\t 1 8 21 39 51 68 71 71 67 64 63 62 62 ",
" 101\t 1 2 5 8 18 20 20 18 18 18 ", " 102\t 1 1 1 ",
" 103\t 1 7 15 32 46 55 59 62 67 68 65 65 64 64 ",
" 104\t 1 4 7 17 20 25 28 31 29 27 26 26 ",
" 105\t 1 3 12 15 22 26 29 27 25 23 23 ",
" 106\t 1 1 1 ", " 107\t 1 7 16 36 54 69 76 78 79 78 80 81 81 80 80 ",
" 108\t 1 5 13 19 30 30 33 34 36 34 34 34 ",
" 109\t 1 8 21 44 64 75 79 77 79 81 85 84 84 83 83 ",
" 110\t 1 1 ", " 111\t 1 6 18 32 55 68 73 74 75 80 80 80 79 78 78 ",
" 112\t 1 7 16 32 38 52 54 54 52 51 49 48 48 ",
" 113\t 1 3 7 10 16 16 16 15 15 ", " 114\t 1 3 11 16 26 30 32 29 31 30 30 ",
" 115\t 1 4 6 9 11 16 15 17 17 ", " 116\t 1 2 2 2 2 ",
" 117\t 1 8 17 32 34 38 36 35 33 33 ", " 118\t 1 8 21 48 77 97 111 112 110 104 100 96 92 91 91 ",
" 119\t 1 1 1 1 ", " 120\t 1 1 2 2 2 ",
" 121\t 1 5 8 14 18 21 20 20 19 19 ", " 122\t 1 4 5 7 7 7 7 ",
" 123\t 1 4 15 26 38 43 47 43 40 40 40 ",
" 124\t 1 5 6 7 7 ", " 125\t 1 5 18 26 34 33 30 31 31 ",
" 126\t 1 7 19 29 42 48 52 51 49 48 48 ",
" 127\t 1 5 13 30 37 44 42 40 40 40 ", " 128\t 1 5 10 20 25 30 31 35 35 33 32 32 ",
" 129\t 1 3 6 6 6 6 ", " 130\t 1 6 17 25 39 48 51 51 50 49 46 44 42 42 ",
" 131\t 1 1 ", " 132\t 1 1 1 1 1 ", " 133\t 1 3 3 4 4 4 ",
" 134\t 1 7 19 40 56 75 78 76 71 67 65 65 ",
" 135\t 1 4 6 6 7 7 7 ", " 136\t 1 2 3 4 4 ",
" 137\t 1 8 18 28 30 31 32 31 30 29 29 ",
" 138\t 1 1 1 ", " 139\t 1 5 11 14 18 16 15 14 13 13 13 ",
" 140\t 1 5 14 25 27 30 30 27 26 25 25 ",
" 141\t 1 6 12 14 15 16 15 14 14 ", " 142\t 1 4 8 16 27 30 32 31 28 27 26 26 ",
" 143\t 1 1 1 2 2 1 1 ", " 144\t 1 4 13 19 27 29 33 33 31 30 30 ",
" 145\t 1 2 2 2 ", " 146\t 1 5 10 22 30 36 36 38 35 33 32 32 ",
" 147\t 1 4 10 11 10 10 10 10 10 ", " 148\t 1 5 10 20 24 28 27 25 24 24 ",
" 149\t 1 1 2 2 2 ", " 150\t 1 6 23 39 59 63 64 60 56 53 53 ",
" 151\t 1 7 13 17 18 16 15 15 15 ", " 152\t 1 5 8 9 8 8 ",
" 153\t 1 1 1 ", " 154\t 1 3 8 11 12 11 10 10 ",
" 155\t 1 3 3 4 4 3 3 ", " 156\t 1 5 15 19 26 26 23 22 21 21 ",
" 157\t 1 4 7 8 8 7 7 ", " 158\t 1 7 17 33 39 40 38 35 33 32 32 ",
" 159\t 1 1 2 2 1 1 ", " 160\t 1 7 16 26 34 37 40 38 40 38 37 37 ",
" 161\t 1 7 12 19 21 24 23 24 24 ", " 162\t 1 5 8 10 11 12 11 11 11 11 ",
" 163\t 1 3 7 8 8 8 8 8 8 ", " 164\t 1 1 1 1 ",
" 165\t 1 1 1 ", " 166\t 1 3 3 3 3 ", " 167\t 1 2 2 2 ",
" 168\t 1 2 3 3 ", " 169\t 1 2 2 ", " 170\t 1 1 ",
" 171\t 1 5 9 15 14 13 12 11 11 11 ", " 172\t 1 8 17 23 33 34 37 36 34 33 33 ",
" 173\t 1 1 ", " 174\t 1 1 1 ", " 175\t 1 8 14 18 25 25 25 24 24 24 ",
" 176\t 1 3 6 8 7 7 ", " 177\t 1 1 1 ",
" 178\t 1 1 ", " 179\t 1 5 6 6 6 6 6 6 ",
" 180\t 1 7 15 19 28 30 31 29 27 26 26 ",
" 181\t 1 6 9 8 6 6 ", " 182\t 1 7 15 26 34 36 36 36 33 31 31 ",
" 183\t 1 1 ", " 184\t 1 4 6 5 5 ", " 185\t 1 1 ",
" 186\t 1 8 14 21 21 20 19 19 ", " 187\t 1 4 10 10 9 8 7 7 7 ",
" 188\t 1 1 ", " 189\t 1 4 5 5 4 4 ", " 190\t 1 4 6 5 4 4 ",
" 191\t 1 2 2 1 1 ", " 192\t 1 4 9 15 29 34 38 38 38 37 35 34 34 ",
" 193\t 1 6 14 27 36 48 48 49 49 47 47 ",
" 194\t 1 4 8 16 22 33 40 46 46 44 42 40 40 ",
" 195\t 1 7 23 37 57 72 79 86 83 79 74 73 72 72 ",
" 196\t 1 3 4 7 9 17 17 17 17 16 16 ",
" 197\t 1 5 13 18 25 27 26 25 26 25 25 ",
" 198\t 1 7 24 46 79 96 99 97 94 93 91 89 87 87 ",
" 199\t 1 5 13 25 30 35 35 38 37 38 38 ",
" 200\t 1 6 11 19 25 37 41 43 44 44 42 40 39 39 ",
" 201\t 1 1 ", " 202\t 1 3 8 10 13 16 17 16 15 15 ",
" 203\t 1 6 14 24 28 36 35 34 33 31 30 30 ",
" 204\t 1 1 ", " 205\t 1 3 3 ", " 206\t 1 6 14 27 36 43 44 43 41 38 37 36 36 ",
" 207\t 1 5 11 13 18 20 19 19 19 ", " 208\t 1 7 16 33 41 48 49 49 49 48 47 47 ",
" 209\t 1 4 11 14 21 22 19 18 18 ", " 210\t 1 1 4 6 9 12 13 12 11 11 ",
" 211\t 1 7 13 24 34 44 52 57 55 53 52 52 52 ",
" 212\t 1 2 6 8 16 17 17 17 16 16 ", " 213\t 1 8 16 29 34 37 37 35 34 33 32 32 ",
" 214\t 1 5 8 16 24 35 36 33 31 31 ", " 215\t 1 1 ",
" 216\t 1 1 ", " 217\t 1 7 9 14 16 16 16 15 15 ",
" 218\t 1 4 6 9 12 13 12 11 11 ", " 219\t 1 1 ",
" 220\t 1 5 8 16 17 17 17 16 16 ", " 221\t 1 3 10 13 13 13 12 12 ",
" 222\t 1 4 13 20 28 29 26 24 24 ", " 223\t 1 5 7 15 18 16 16 16 ",
" 224\t 1 2 2 5 7 13 14 15 14 14 ", " 225\t 1 1 4 6 12 13 14 13 13 ",
" 226\t 1 1 ", " 227\t 1 7 11 17 21 27 29 31 32 29 29 ",
" 228\t 1 6 10 11 21 23 29 26 22 21 20 20 ",
" 229\t 1 4 6 16 19 20 18 18 18 ", " 230\t 1 8 20 40 63 93 104 100 97 95 94 92 90 89 89 ",
" 231\t 1 4 10 12 20 22 24 22 22 22 ", " 232\t 1 8 21 31 41 45 55 55 55 50 49 48 47 47 ",
" 233\t 1 6 7 10 12 17 18 16 15 15 ", " 234\t 1 5 5 5 ",
" 235\t 1 1 ", " 236\t 1 3 5 6 6 ", " 237\t 1 2 4 4 ",
" 238\t 1 7 17 27 36 40 44 44 43 41 38 37 36 36 ",
" 239\t 1 2 3 5 5 ", " 240\t 1 5 13 16 23 24 28 26 22 21 21 ",
" 241\t 1 4 6 12 13 14 13 13 ", " 242\t 1 8 13 22 32 43 44 45 43 39 38 38 ",
" 243\t 1 1 ", " 244\t 1 1 ", " 245\t 1 3 10 12 13 11 11 ",
" 246\t 1 1 1 ", " 247\t 1 6 8 13 15 17 15 15 ",
" 248\t 1 6 8 10 9 9 ", " 249\t 1 1 1 ",
" 250\t 1 1 ", " 251\t 1 8 18 32 43 49 50 49 44 41 41 41 ",
" 252\t 1 2 2 ", " 253\t 1 4 7 10 10 9 9 ",
" 254\t 1 4 7 9 8 7 7 ", " 255\t 1 6 18 23 30 28 25 25 ",
"", "/* Chains */", " nchains: 12", " id\tsteps\tdepth\torigins",
" 1\t2\t1\t2", " 2\t1\t1\t1", " 3\t3\t1\t3", " 4\t3\t2\t2",
" 5\t1\t1\t1", " 6\t1\t1\t1", " 7\t2\t1\t2", " 8\t3\t2\t2",
" 9\t4\t2\t3", " 10\t2\t2\t1", " 11\t3\t2\t2", " 12\t1\t1\t1",
"", "/* Count when mu at loci i->j are both beneficials (first i, then j) */",
" 1->2: 40", " 1->3: 47", " 1->4: 43", " 1->5: 51", " 1->6: 42",
" 1->7: 50", " 1->8: 44", " 2->1: 40", " 2->3: 45", " 2->4: 44",
" 2->5: 48", " 2->6: 49", " 2->7: 50", " 2->8: 45", " 3->1: 47",
" 3->2: 45", " 3->4: 53", " 3->5: 49", " 3->6: 49", " 3->7: 50",
" 3->8: 48", " 4->1: 43", " 4->2: 44", " 4->3: 53", " 4->5: 47",
" 4->6: 44", " 4->7: 44", " 4->8: 42", " 5->1: 51", " 5->2: 48",
" 5->3: 49", " 5->4: 47", " 5->6: 51", " 5->7: 48", " 5->8: 46",
" 6->1: 42", " 6->2: 49", " 6->3: 49", " 6->4: 44", " 6->5: 51",
" 6->7: 39", " 6->8: 40", " 7->1: 50", " 7->2: 50", " 7->3: 50",
" 7->4: 44", " 7->5: 48", " 7->6: 39", " 7->8: 41", " 8->1: 44",
" 8->2: 45", " 8->3: 48", " 8->4: 42", " 8->5: 46", " 8->6: 40",
" 8->7: 41", "Pairs Mean: 46.035714 ; Stdev: 3.780160 ; Skewness: -0.166924",
"", "/* Adaptive walk statistics */", "G\tE[steps]\tV[steps]\tReachblty\tFitterG\tP[7]\tP[17]\tP[29]\tP[32]\tP[35]\tP[59]\tP[66]\tP[75]\tP[76]\tP[80]\tP[100]\tP[109]\tP[117]\tP[118]\tP[137]\tP[172]\tP[175]\tP[186]\tP[213]\tP[230]\tP[232]\tP[242]\tP[251]",
"0\t2.569\t1.464\t40\t101\t\t-0.000\t0.091\t-0.000\t0.243\t0.000\t-0.000\t0.297\t0.107\t0.046\t0.068\t0.077\t0.000\t0.000\t0.017\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.053\t0.000\t-0.000\t-0.000",
"1\t2.273\t0.926\t6\t51\t\t0.000\t0.364\t0.000\t-0.000\t-0.000\t-0.000\t0.113\t0.524\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t-0.000\t-0.000",
"2\t1.000\t0.000\t1\t8\t\t0.000\t-0.000\t-0.000\t0.000\t0.000\t0.000\t1.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000",
"3\t1.909\t0.787\t18\t84\t\t0.157\t0.075\t-0.000\t0.000\t0.158\t0.000\t0.293\t0.305\t-0.000\t0.002\t0.000\t0.000\t0.000\t0.010\t0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000",
"4\t2.422\t0.551\t9\t59\t\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.116\t0.000\t0.264\t0.000\t0.467\t0.000\t-0.000\t0.045\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t0.108\t-0.000\t0.000\t0.000",
"5\t2.685\t1.812\t28\t158\t\t0.314\t0.108\t-0.000\t-0.000\t-0.000\t-0.000\t0.087\t0.189\t0.085\t0.000\t0.150\t0.000\t-0.000\t0.016\t0.000\t-0.000\t-0.000\t0.000\t0.014\t0.038\t0.000\t0.000\t0.000",
"6\t2.729\t0.955\t38\t155\t\t0.159\t0.000\t0.000\t0.020\t0.008\t-0.000\t0.273\t0.056\t0.036\t0.000\t0.074\t-0.000\t0.000\t0.167\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.208\t0.000\t0.000\t0.000",
"8\t3.149\t0.798\t50\t152\t\t0.006\t0.030\t-0.000\t0.052\t0.000\t0.000\t0.245\t0.446\t0.125\t0.015\t0.032\t-0.000\t-0.000\t0.005\t0.028\t-0.000\t-0.000\t0.000\t0.000\t0.015\t0.000\t0.000\t0.000",
"9\t2.075\t0.838\t9\t129\t\t0.000\t0.087\t-0.000\t-0.000\t0.000\t-0.000\t0.027\t0.654\t0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.231\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000",
"10\t2.057\t0.103\t8\t38\t\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.584\t0.409\t0.008\t0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t-0.000",
"11\t1.000\t0.000\t1\t23\t\t-0.000\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t1.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000",
"12\t2.668\t1.880\t20\t137\t\t0.057\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.148\t0.137\t0.453\t0.000\t0.154\t-0.000\t-0.000\t0.015\t0.000\t-0.000\t-0.000\t0.000\t0.000\t0.036\t0.000\t0.000\t-0.000",
"13\t2.517\t1.676\t49\t179\t\t0.152\t0.024\t0.233\t-0.000\t-0.000\t0.000\t0.036\t0.268\t0.080\t-0.000\t0.037\t0.000\t0.000\t0.004\t0.135\t0.018\t0.000\t0.000\t0.001\t0.011\t0.000\t-0.000\t0.000",
"14\t2.847\t0.230\t11\t74\t\t0.188\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.360\t0.447\t0.005\t0.000\t-0.000\t0.000\t-0.000\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000",
"15\t1.510\t0.250\t3\t54\t\t0.490\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.510\t0.000\t0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000",
"16\t1.699\t1.152\t9\t72\t\t-0.000\t0.292\t-0.000\t0.000\t0.000\t0.000\t0.210\t0.000\t0.000\t0.417\t0.000\t0.000\t-0.000\t0.081\t-0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000",
"18\t2.262\t0.193\t7\t37\t\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.680\t0.000\t0.000\t0.058\t0.000\t-0.000\t-0.000\t0.262\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000",
"19\t2.168\t1.377\t9\t69\t\t0.000\t0.484\t0.000\t0.000\t0.000\t-0.000\t0.351\t0.000\t0.000\t0.030\t0.000\t-0.000\t0.000\t0.135\t-0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000",
"20\t3.556\t1.846\t36\t161\t\t-0.000\t0.067\t-0.000\t0.000\t-0.000\t0.000\t0.079\t0.000\t0.070\t0.127\t0.123\t-0.000\t-0.000\t0.361\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.172\t0.000\t-0.000\t-0.000",
"21\t2.133\t2.896\t63\t182\t\t0.073\t0.352\t0.316\t0.000\t-0.000\t0.001\t0.029\t0.027\t0.015\t0.012\t0.027\t0.000\t0.000\t0.104\t-0.000\t-0.000\t-0.000\t0.000\t0.002\t0.041\t0.000\t0.000\t0.000",
"22\t2.000\t0.000\t2\t32\t\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t1.000\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000",
"23\t3.043\t1.880\t37\t145\t\t0.218\t0.085\t0.039\t-0.000\t0.000\t0.005\t0.074\t0.035\t0.000\t0.005\t0.000\t0.001\t0.000\t0.410\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.129\t-0.000\t-0.000\t-0.000",
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"200\t2.033\t0.862\t5\t42\t\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.448\t0.137\t0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.415\t0.000\t0.000",
"201\t2.658\t1.547\t31\t233\t\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.099\t0.555\t0.024\t0.008\t0.000\t0.010\t-0.000\t0.000\t0.172\t0.000\t0.000\t0.000\t0.008\t0.000\t0.125\t0.000\t0.000",
"202\t2.746\t0.618\t19\t48\t\t0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000\t0.201\t0.393\t0.021\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.348\t0.037\t-0.000\t-0.000",
"203\t1.748\t0.937\t4\t35\t\t-0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.181\t0.819\t0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000",
"204\t2.702\t1.717\t69\t254\t\t0.002\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.020\t0.118\t0.272\t0.010\t0.037\t0.000\t0.000\t0.009\t-0.000\t0.103\t0.000\t0.000\t0.018\t0.319\t0.093\t-0.000\t0.000",
"205\t3.356\t1.629\t46\t226\t\t0.003\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.101\t0.261\t0.002\t-0.000\t0.001\t0.000\t0.000\t0.001\t0.169\t0.032\t-0.000\t-0.000\t0.227\t0.202\t-0.000\t-0.000\t0.000",
"206\t2.000\t0.000\t3\t22\t\t0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t1.000\t0.000\t-0.000\t0.000",
"207\t2.967\t0.503\t19\t86\t\t0.007\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.108\t0.375\t0.000\t0.000\t0.000\t0.000\t0.000\t0.001\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.508\t0.000\t-0.000\t0.000",
"208\t1.000\t0.000\t1\t28\t\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t1.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t-0.000",
"209\t2.730\t1.688\t11\t122\t\t-0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.203\t0.289\t0.000\t0.254\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.254\t0.000\t-0.000\t-0.000\t0.000",
"210\t2.805\t1.540\t22\t100\t\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.240\t0.092\t0.000\t0.185\t0.000\t0.000\t0.000\t0.130\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.189\t0.000\t0.164\t-0.000",
"211\t3.000\t0.000\t7\t33\t\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.483\t0.517\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000",
"212\t2.958\t2.697\t48\t160\t\t0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.017\t0.015\t0.019\t0.233\t0.041\t0.000\t0.000\t0.165\t-0.000\t-0.000\t0.000\t-0.000\t0.214\t0.293\t0.003\t-0.000\t-0.000",
"214\t2.111\t0.210\t7\t41\t\t-0.000\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.457\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.543\t-0.000\t-0.000\t0.000",
"215\t3.363\t1.651\t56\t230\t\t0.016\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.126\t0.128\t0.000\t0.000\t0.000\t0.012\t-0.000\t0.248\t-0.000\t-0.000\t-0.000\t-0.000\t0.156\t0.282\t0.000\t-0.000\t0.031",
"216\t3.174\t1.743\t82\t213\t\t0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.078\t0.211\t0.047\t0.339\t0.000\t0.000\t0.000\t0.030\t-0.000\t0.001\t-0.000\t0.000\t0.010\t0.049\t0.206\t0.030\t0.000",
"217\t3.730\t1.688\t12\t166\t\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.203\t0.289\t0.000\t0.254\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.254\t0.000\t-0.000\t-0.000\t0.000",
"218\t3.724\t0.818\t41\t114\t\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.293\t0.265\t0.014\t0.064\t0.000\t0.000\t0.000\t0.103\t0.000\t0.000\t0.000\t0.000\t0.000\t0.221\t0.015\t0.026\t0.000",
"219\t3.238\t2.405\t68\t197\t\t0.000\t0.003\t-0.000\t0.000\t0.000\t0.003\t0.234\t0.439\t0.003\t0.026\t0.000\t0.001\t0.000\t0.035\t0.000\t0.000\t-0.000\t0.000\t0.009\t0.046\t0.002\t0.004\t0.193",
"220\t4.360\t1.250\t68\t172\t\t0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.020\t0.012\t0.005\t0.042\t0.007\t0.000\t0.000\t0.271\t-0.000\t0.021\t-0.000\t-0.000\t0.035\t0.585\t0.000\t-0.000\t0.000",
"221\t2.052\t2.211\t91\t189\t\t0.000\t0.000\t0.328\t0.000\t-0.000\t0.000\t0.020\t0.031\t0.000\t0.023\t0.000\t0.011\t0.008\t0.019\t0.000\t0.001\t0.000\t-0.000\t0.498\t0.047\t0.000\t0.000\t0.014",
"222\t3.227\t0.404\t27\t109\t\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.023\t0.013\t0.001\t0.005\t0.000\t0.000\t0.000\t0.304\t-0.000\t0.000\t-0.000\t-0.000\t0.000\t0.655\t-0.000\t-0.000\t0.000",
"223\t3.541\t1.170\t52\t170\t\t0.003\t0.000\t-0.000\t-0.000\t-0.000\t0.001\t0.047\t0.141\t0.000\t0.002\t0.000\t0.026\t0.000\t0.120\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.400\t0.000\t-0.000\t0.262",
"224\t2.155\t1.135\t30\t94\t\t-0.000\t-0.000\t0.000\t0.313\t-0.000\t0.000\t0.064\t0.050\t0.004\t0.112\t0.093\t0.000\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.042\t0.272\t0.049\t-0.000",
"225\t3.620\t0.642\t55\t171\t\t0.000\t0.000\t0.000\t0.205\t0.000\t-0.000\t0.198\t0.404\t0.001\t0.018\t0.025\t0.014\t0.001\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.011\t0.022\t0.092\t0.008\t0.000",
"226\t2.633\t1.870\t41\t147\t\t0.000\t0.000\t0.000\t0.086\t0.002\t-0.000\t0.291\t0.097\t0.001\t0.012\t0.010\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.293\t0.064\t0.144\t-0.000",
"227\t3.000\t0.000\t8\t62\t\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.483\t0.517\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.000",
"228\t1.000\t0.000\t2\t87\t\t-0.000\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t-0.000\t0.000\t0.500\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.500\t-0.000\t-0.000\t-0.000",
"229\t2.975\t1.775\t31\t157\t\t0.003\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.097\t0.155\t0.000\t0.000\t0.177\t0.092\t0.012\t0.001\t0.000\t0.000\t0.000\t0.000\t0.195\t0.269\t-0.000\t0.000\t0.000",
"231\t2.743\t1.535\t17\t111\t\t0.011\t0.000\t0.000\t0.000\t0.000\t0.000\t0.166\t0.174\t-0.000\t0.000\t-0.000\t0.250\t0.000\t0.002\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.396\t0.000\t0.000\t0.000",
"233\t1.925\t1.682\t20\t150\t\t0.000\t0.000\t0.000\t0.001\t-0.000\t0.000\t0.017\t0.283\t0.001\t0.000\t0.001\t0.109\t-0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.587\t0.000\t0.000",
"234\t2.181\t1.414\t20\t103\t\t-0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.061\t0.118\t0.006\t0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t-0.000\t0.000\t0.460\t0.355\t-0.000\t-0.000",
"235\t2.773\t1.503\t62\t223\t\t0.000\t0.000\t0.000\t0.000\t0.029\t0.002\t0.113\t0.441\t0.001\t0.000\t0.000\t0.036\t-0.000\t0.001\t0.001\t0.000\t0.034\t0.000\t-0.000\t0.102\t0.091\t0.000\t0.148",
"236\t1.600\t0.240\t9\t195\t\t-0.000\t0.000\t-0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.063\t-0.000\t0.164\t0.063\t-0.000\t0.000\t0.000\t0.188\t0.000\t0.000\t0.000\t0.310\t0.212\t0.000\t0.000",
"237\t2.477\t2.445\t60\t205\t\t0.001\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.028\t0.103\t0.000\t0.000\t0.026\t0.504\t0.002\t0.002\t0.000\t-0.000\t0.022\t0.000\t0.029\t0.146\t0.114\t0.000\t0.022",
"238\t1.000\t0.000\t1\t20\t\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t1.000\t-0.000\t0.000\t-0.000",
"239\t2.537\t1.249\t44\t134\t\t0.003\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.041\t0.096\t0.000\t0.000\t0.000\t0.279\t0.000\t0.007\t0.000\t0.000\t0.084\t0.000\t-0.000\t0.405\t0.000\t0.000\t0.086",
"240\t1.580\t0.244\t4\t78\t\t0.000\t-0.000\t0.000\t-0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.580\t-0.000\t-0.000\t-0.000\t-0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.420\t-0.000",
"241\t3.204\t1.348\t84\t187\t\t0.000\t0.000\t-0.000\t0.011\t0.000\t0.001\t0.096\t0.149\t0.000\t0.405\t0.001\t0.002\t0.009\t0.002\t0.000\t-0.000\t-0.000\t-0.000\t0.102\t0.001\t0.005\t0.213\t0.000",
"243\t2.890\t2.449\t54\t220\t\t0.001\t0.003\t-0.000\t0.000\t0.006\t0.003\t0.242\t0.236\t0.000\t0.006\t0.000\t0.018\t-0.000\t0.037\t0.000\t0.000\t0.000\t0.000\t0.000\t0.017\t0.000\t0.219\t0.213",
"244\t3.427\t2.966\t64\t255\t\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.001\t0.001\t0.003\t0.202\t0.165\t0.002\t0.028\t0.124\t0.000\t-0.000\t0.000\t-0.000\t0.016\t0.343\t0.000\t0.112\t0.000",
"245\t1.859\t2.323\t53\t192\t\t0.001\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.026\t0.035\t0.000\t0.000\t0.024\t0.038\t0.355\t0.005\t-0.000\t0.000\t-0.000\t-0.000\t0.388\t0.067\t0.000\t-0.000\t0.062",
"246\t2.338\t2.766\t38\t248\t\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.007\t0.007\t0.000\t0.000\t0.000\t0.013\t0.000\t0.324\t-0.000\t0.000\t-0.000\t0.000\t-0.000\t0.431\t-0.000\t0.187\t0.032",
"247\t3.044\t1.563\t43\t154\t\t0.006\t0.000\t0.000\t-0.000\t0.000\t0.001\t0.085\t0.091\t0.000\t0.000\t0.000\t0.168\t-0.000\t0.032\t0.000\t0.000\t-0.000\t0.000\t-0.000\t0.203\t-0.000\t0.000\t0.414",
"248\t1.535\t0.642\t6\t98\t\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.000\t0.197\t0.000\t-0.000\t0.000\t-0.000\t-0.000\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.661\t0.142\t0.000",
"249\t2.540\t2.079\t62\t238\t\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.028\t0.019\t0.159\t0.001\t0.070\t0.001\t0.062\t0.016\t0.003\t-0.000\t-0.000\t-0.000\t0.000\t0.014\t0.000\t0.280\t0.040\t0.308",
"250\t2.395\t2.419\t62\t221\t\t0.000\t0.000\t-0.000\t-0.000\t-0.000\t0.003\t0.081\t0.067\t0.003\t0.044\t0.000\t0.000\t-0.000\t0.072\t-0.000\t0.000\t0.000\t0.123\t-0.000\t0.096\t0.150\t0.206\t0.154",
"252\t2.901\t0.872\t86\t243\t\t0.000\t0.000\t-0.000\t0.000\t-0.000\t0.000\t0.001\t0.001\t0.055\t0.108\t0.058\t0.082\t0.021\t0.206\t-0.000\t0.001\t0.000\t0.000\t0.002\t0.034\t0.354\t0.076\t0.000",
"253\t2.285\t0.502\t38\t203\t\t0.000\t0.000\t0.000\t0.000\t0.000\t0.002\t0.000\t0.003\t0.000\t0.000\t-0.000\t0.298\t0.198\t0.058\t0.000\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.440",
"254\t2.591\t1.049\t45\t180\t\t0.000\t0.000\t-0.000\t-0.000\t0.000\t0.000\t0.005\t0.004\t0.000\t0.001\t0.000\t0.018\t-0.000\t0.348\t-0.000\t0.000\t0.000\t0.000\t-0.000\t0.434\t0.000\t-0.000\t0.189",
"255\t1.307\t0.534\t35\t115\t\t0.000\t0.000\t0.000\t-0.000\t-0.000\t0.002\t0.000\t0.003\t0.000\t0.000\t0.000\t0.083\t-0.000\t0.063\t0.000\t0.000\t-0.000\t0.000\t0.000\t0.000\t0.000\t-0.000\t0.850",
"", "", "/* Summary adaptive walk statistics */", "Mean E[steps]: 2.561\tStdev E[steps]: 0.904\tMean V[steps]: 1.178\tStdev V[steps]: 0.967\tMean Reachability: 31.858\tStdev Reachability: 23.692\tMean FitterG: 136.215\tStdev FitterG: 70.986\tMean P[7]: 0.019\tVar P[7]: 0.059\tMean P[17]: 0.022\tVar P[17]: 0.069\tMean P[29]: 0.028\tVar P[29]: 0.107\tMean P[32]: 0.051\tVar P[32]: 0.140\tMean P[35]: 0.017\tVar P[35]: 0.055\tMean P[59]: 0.015\tVar P[59]: 0.062\tMean P[66]: 0.129\tVar P[66]: 0.164\tMean P[75]: 0.166\tVar P[75]: 0.214\tMean P[76]: 0.023\tVar P[76]: 0.060\tMean P[80]: 0.051\tVar P[80]: 0.131\tMean P[100]: 0.032\tVar P[100]: 0.084\tMean P[109]: 0.047\tVar P[109]: 0.134\tMean P[117]: 0.016\tVar P[117]: 0.075\tMean P[118]: 0.104\tVar P[118]: 0.180\tMean P[137]: 0.018\tVar P[137]: 0.079\tMean P[172]: 0.016\tVar P[172]: 0.075\tMean P[175]: 0.009\tVar P[175]: 0.048\tMean P[186]: 0.008\tVar P[186]: 0.037\tMean P[213]: 0.018\tVar P[213]: 0.071\tMean P[230]: 0.152\tVar P[230]: 0.231\tMean P[232]: 0.025\tVar P[232]: 0.087\tMean P[242]: 0.014\tVar P[242]: 0.050\tMean P[251]: 0.021\tVar P[251]: 0.085"
)
)
## position 21 differs in Windoze and Mac
expect_identical(s9s[-21], s9s_compare[-21])
## Go figure, a bunch of lines differ in Windows and Mac
skip_on_os(c("windows", "mac"))
expect_identical(s9l, s9l_compare)
})
set.seed(NULL)
cat(paste("\n Ended test.Z-magellan at", date(), "\n"))
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