read_regions: Read regions from a data.frame, a file or a connection.
In NGScopy: NGScopy: Detection of Copy Number Variations in Next Generation Sequencing sequencing
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Read regions from a data.frame, a file or a connection.
Usage
1
read_regions(x)
Arguments
x
data.frame or character, the regions in study.
A data.frame with three columns (chr/start/end), a file path or a
connection with three columns (chr/start/end) without column names.
Return an empty data.frame if "", "NULL" or NULL.
Value
data.frame of three columns (chr/start/end)
Author(s)
Xiaobei Zhao
Examples
1
2
3
4
5
6
7
8
read_regions("
chr1 0 249250621
chr2 0 243199373
chr3 0 198022430
chr4 0 191154276
chr5 0 180915260
chr6 0 171115067
")
Example output
NGScopy documentation built on May 6, 2019, 2:43 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Read regions from a data.frame, a file or a connection.
Usage
1 | read_regions(x)
|
Arguments
x |
data.frame or character, the regions in study. A data.frame with three columns (chr/start/end), a file path or a connection with three columns (chr/start/end) without column names. Return an empty data.frame if "", "NULL" or NULL. |
Value
data.frame of three columns (chr/start/end)
Author(s)
Xiaobei Zhao
Examples
1 2 3 4 5 6 7 8 | read_regions("
chr1 0 249250621
chr2 0 243199373
chr3 0 198022430
chr4 0 191154276
chr5 0 180915260
chr6 0 171115067
")
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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