expandSequence: Expand nucleotide sequence

Description Usage Arguments Value Author(s) Examples

Description

Function to process shorthand form of a nucleotide sequence, where a given base pair followed by a number specifies a run of the indicated nucleotide for the specified length (ex: "A6TTCGA4")

Usage

1

Arguments

sequence

Nucleotide sequence input as a character string

Value

Returns an expanded nucleotide sequence as a character string

Author(s)

Reid F. Thompson (rthompso@aecom.yu.edu), John M. Greally (jgreally@aecom.yu.edu)

Examples

1
2
3
expandSequence("A6TTCGA4")
expandSequence("C10C10")
expandSequence("AT1CG")

MassArray documentation built on Nov. 8, 2020, 5:16 p.m.