getDefaultDataOptions: Get default data options
In MOFA: Multi-Omics Factor Analysis (MOFA)
Description
Usage
Details
Value
Examples
Description
Function to obtain the default data options.
Usage
1
Details
The data options are the following:
scaleViews: logical indicating whether to scale views to have the same unit variance.
As long as the scale differences between the data sets is not too high, this is not required.
Default is FALSE.
removeIncompleteSamples: logical indicating whether to remove samples that
are not profiled in all omics. We recommend this only for testing,
as the model can cope with samples having missing assays. Default is FALSE.
Value
Returns a list with the default data options, which have to be passed as
an argument to prepareMOFA
Examples
1
2
MOFA documentation built on Feb. 11, 2021, 2:01 a.m.
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Description Usage Details Value Examples
Description
Function to obtain the default data options.
Usage
1 |
Details
The data options are the following:
scaleViews: logical indicating whether to scale views to have the same unit variance. As long as the scale differences between the data sets is not too high, this is not required. Default is FALSE.
removeIncompleteSamples: logical indicating whether to remove samples that are not profiled in all omics. We recommend this only for testing, as the model can cope with samples having missing assays. Default is FALSE.
Value
Returns a list with the default data options, which have to be passed as
an argument to prepareMOFA
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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