plotGOgraph: Graphical Representation of GO Based MLP Results

In MLP: MLP

Description

Graphical Representation of GO Based MLP Results

Usage

plotGOgraph(object, nRow = 5, main = NULL, nCutDescPath = 30)

Arguments

object	object of class MLP (as produced by the MLP function)
nRow	number of GO IDs for which to produce the plot
main	main title of the graph; if NULL (default) the main title is set to 'GO graph'
nCutDescPath	number of characters at which the pathway description should be cut (inserted in a new line), 30 by default

Value

GO graph is plotted to the current device

Examples

if (require(GO.db) && require(Rgraphviz)){
  pathExampleMLPResult <- system.file("exampleFiles", "exampleMLPResult.rda", package = "MLP")
  load(pathExampleMLPResult)
  plotGOgraph(exampleMLPResult, main = "GO Graph")
}

MLP documentation built on Nov. 8, 2020, 8:23 p.m.