get_plot: Logo plot for given co-ordinates and fill values

In Logolas: EDLogo Plots Featuring String Logos and Adaptive Scaling of Position-Weight Matrices

Description

Plots logo given the co-ordinates and fill values of the symbols.

Usage

get_plot(x, y, id, fill, colfill, lwd = 10, fill_symbol = TRUE)

Arguments

x	The X co-ordinates of the symbol
y	The Y co-ordinates of the symbol
id	The id of the different points based on how it will be grouped
fill	The color vector used for filling the logo.
colfill	The color label for the borders of the plot.
lwd	Specifies the border width of the symbol. Defaults to 10.
fill_symbol	A binary. If TRUE, the function would fill the symbol by the color represented in colfill, else colors the boundary of the symbol by colfill. Defaults to TRUE.

Value

Returns a plot of the symbol with the input co-ordinates and fill colors

Examples

angle2 <- c(seq(pi/2, 0, length.out=100), seq(0, -(3*pi/2), length.out=100))
x1 <- 0.5 + 0.3*cos(angle2)
y1 <- 0.5 + 0.5*sin(angle2)
x2 <- 0.5 + 0.15*cos(angle2)
y2 <- 0.5 + 0.35*sin(angle2)
x <- c(x1, x2)
y <- c(y1, y2)
colfill <- "green"
id <- c(rep(1, length(x1)), rep(2, length(x2)))
fill <- c(colfill, "white")
get_plot(x, y, id, fill, colfill, lwd=10, fill_symbol=TRUE)

Logolas documentation built on April 28, 2020, 8:55 p.m.