Files in IMAS
Integrative analysis of Multi-omics data for Alternative Splicing
README.md
IMAS documentation built on Nov. 8, 2020, 7:48 p.m.
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
data/bamfilestest.rda
data/sampleclinical.rda
data/samplemethyllocus.rda
data/samplesnplocus.rda
data/samplesnp.rda
data/samplemethyl.rda
data/sampleGroups.rda
R/SplicingReads.R
R/ExonsCluster.R
R/CompGroupAlt.R
R/ASvisualization.R
R/MEsQTLFinder.R
R/RatioFromReads.R
R/ClinicAnalysis.R
vignettes/IMAS.Rnw
vignettes/img/ES3.pdf
man/samplesnp.Rd
man/MEsQTLFinder.Rd
man/GroupSam.Rd
man/samplebamfiles.Rd
man/ClinicAnalysis.Rd
man/sampleMedata.Rd
man/ExonsCluster.Rd
man/ASvisualization.Rd
man/samplesnplocus.Rd
man/sampleMelocus.Rd
man/Clinical.data.Rd
man/SplicingReads.Rd
man/IMAS-package.Rd
man/CompGroupAlt.Rd
man/RatioFromReads.Rd
tests/runTests.R
inst/doc/IMAS.R
inst/doc/IMAS.pdf
inst/doc/IMAS.Rnw
inst/extdata/sampleDB
inst/extdata/samplebam/srt.BreastPatient_30.bam.bai
inst/extdata/samplebam/srt.BreastPatient_45.bam
inst/extdata/samplebam/srt.BreastPatient_45.bam.bai
inst/extdata/samplebam/srt.BreastPatient_40.bam
inst/extdata/samplebam/srt.BreastPatient_6.bam.bai
inst/extdata/samplebam/srt.BreastPatient_10.bam.bai
inst/extdata/samplebam/srt.BreastPatient_25.bam.bai
inst/extdata/samplebam/srt.BreastPatient_8.bam
inst/extdata/samplebam/srt.BreastPatient_35.bam.bai
inst/extdata/samplebam/srt.BreastPatient_5.bam.bai
inst/extdata/samplebam/srt.BreastPatient_48.bam
inst/extdata/samplebam/srt.BreastPatient_19.bam
inst/extdata/samplebam/srt.BreastPatient_50.bam
inst/extdata/samplebam/srt.BreastPatient_8.bam.bai
inst/extdata/samplebam/srt.BreastPatient_37.bam
inst/extdata/samplebam/srt.BreastPatient_15.bam
inst/extdata/samplebam/srt.BreastPatient_21.bam.bai
inst/extdata/samplebam/srt.BreastPatient_24.bam.bai
inst/extdata/samplebam/srt.BreastPatient_44.bam
inst/extdata/samplebam/srt.BreastPatient_9.bam
inst/extdata/samplebam/srt.BreastPatient_47.bam.bai
inst/extdata/samplebam/srt.BreastPatient_2.bam
inst/extdata/samplebam/srt.BreastPatient_36.bam
inst/extdata/samplebam/srt.BreastPatient_18.bam.bai
inst/extdata/samplebam/srt.BreastPatient_26.bam
inst/extdata/samplebam/srt.BreastPatient_23.bam
inst/extdata/samplebam/srt.BreastPatient_11.bam
inst/extdata/samplebam/srt.BreastPatient_24.bam
inst/extdata/samplebam/srt.BreastPatient_50.bam.bai
inst/extdata/samplebam/srt.BreastPatient_6.bam
inst/extdata/samplebam/srt.BreastPatient_11.bam.bai
inst/extdata/samplebam/srt.BreastPatient_17.bam
inst/extdata/samplebam/srt.BreastPatient_48.bam.bai
inst/extdata/samplebam/srt.BreastPatient_21.bam
inst/extdata/samplebam/srt.BreastPatient_30.bam
inst/extdata/samplebam/srt.BreastPatient_28.bam.bai
inst/extdata/samplebam/srt.BreastPatient_13.bam
inst/extdata/samplebam/srt.BreastPatient_46.bam
inst/extdata/samplebam/srt.BreastPatient_41.bam
inst/extdata/samplebam/srt.BreastPatient_26.bam.bai
inst/extdata/samplebam/srt.BreastPatient_33.bam.bai
inst/extdata/samplebam/srt.BreastPatient_4.bam.bai
inst/extdata/samplebam/srt.BreastPatient_44.bam.bai
inst/extdata/samplebam/srt.BreastPatient_9.bam.bai
inst/extdata/samplebam/srt.BreastPatient_5.bam
inst/extdata/samplebam/srt.BreastPatient_10.bam
inst/extdata/samplebam/srt.BreastPatient_42.bam
inst/extdata/samplebam/srt.BreastPatient_1.bam
inst/extdata/samplebam/srt.BreastPatient_12.bam.bai
inst/extdata/samplebam/srt.BreastPatient_2.bam.bai
inst/extdata/samplebam/srt.BreastPatient_34.bam.bai
inst/extdata/samplebam/srt.BreastPatient_36.bam.bai
inst/extdata/samplebam/srt.BreastPatient_22.bam
inst/extdata/samplebam/srt.BreastPatient_29.bam.bai
inst/extdata/samplebam/srt.BreastPatient_42.bam.bai
inst/extdata/samplebam/srt.BreastPatient_27.bam
inst/extdata/samplebam/srt.BreastPatient_32.bam
inst/extdata/samplebam/srt.BreastPatient_40.bam.bai
inst/extdata/samplebam/srt.BreastPatient_49.bam
inst/extdata/samplebam/srt.BreastPatient_38.bam
inst/extdata/samplebam/srt.BreastPatient_15.bam.bai
inst/extdata/samplebam/srt.BreastPatient_43.bam
inst/extdata/samplebam/srt.BreastPatient_49.bam.bai
inst/extdata/samplebam/srt.BreastPatient_25.bam
inst/extdata/samplebam/srt.BreastPatient_14.bam.bai
inst/extdata/samplebam/srt.BreastPatient_22.bam.bai
inst/extdata/samplebam/srt.BreastPatient_31.bam
inst/extdata/samplebam/srt.BreastPatient_29.bam
inst/extdata/samplebam/srt.BreastPatient_47.bam
inst/extdata/samplebam/srt.BreastPatient_12.bam
inst/extdata/samplebam/srt.BreastPatient_20.bam.bai
inst/extdata/samplebam/srt.BreastPatient_14.bam
inst/extdata/samplebam/srt.BreastPatient_17.bam.bai
inst/extdata/samplebam/srt.BreastPatient_39.bam.bai
inst/extdata/samplebam/srt.BreastPatient_13.bam.bai
inst/extdata/samplebam/srt.BreastPatient_1.bam.bai
inst/extdata/samplebam/srt.BreastPatient_43.bam.bai
inst/extdata/samplebam/srt.BreastPatient_46.bam.bai
inst/extdata/samplebam/srt.BreastPatient_28.bam
inst/extdata/samplebam/srt.BreastPatient_34.bam
inst/extdata/samplebam/srt.BreastPatient_7.bam
inst/extdata/samplebam/srt.BreastPatient_23.bam.bai
inst/extdata/samplebam/srt.BreastPatient_32.bam.bai
inst/extdata/samplebam/srt.BreastPatient_39.bam
inst/extdata/samplebam/srt.BreastPatient_27.bam.bai
inst/extdata/samplebam/srt.BreastPatient_18.bam
inst/extdata/samplebam/srt.BreastPatient_33.bam
inst/extdata/samplebam/srt.BreastPatient_3.bam.bai
inst/extdata/samplebam/srt.BreastPatient_16.bam
inst/extdata/samplebam/srt.BreastPatient_37.bam.bai
inst/extdata/samplebam/srt.BreastPatient_38.bam.bai
inst/extdata/samplebam/srt.BreastPatient_31.bam.bai
inst/extdata/samplebam/srt.BreastPatient_16.bam.bai
inst/extdata/samplebam/srt.BreastPatient_7.bam.bai
inst/extdata/samplebam/srt.BreastPatient_3.bam
inst/extdata/samplebam/srt.BreastPatient_19.bam.bai
inst/extdata/samplebam/srt.BreastPatient_4.bam
inst/extdata/samplebam/srt.BreastPatient_35.bam
inst/extdata/samplebam/srt.BreastPatient_41.bam.bai
inst/extdata/samplebam/srt.BreastPatient_20.bam
inst/unitTests/test_functions.R
