hpa_histology_data: HPA histology dataset

In HPAanalyze: Retrieve and analyze data from the Human Protein Atlas

Description

Dataset downloaded with hpaDownload('histology', version = 'latest'). This should be the most updated dataset at the time of generation. Check metadata for more information.

Usage

hpa_histology_data

Format

A list of 3 tibbles

normal_tissue

Normal tissue IHC data

pathology

Cancer IHC data

subcellular_location

Subcellular location IF data

See Also

hpaDownload

Examples

  # load data
  data("hpa_histology_data")

  # access data frames
  normal_tissue_data <- hpa_histology_data$normal_tissue
  cancer_data <- hpa_histology_data$pathology
  subcell_location_data <- hpa_histology_data$subcellular_location
  
  # see metadata
  hpa_histology_data$metadata

Example output

$HPAversion
[1] "20"

$date
[1] "2020-11-24 17:46:06 UTC"

$packageVersion
[1] "1.9.1"

HPAanalyze documentation built on Nov. 26, 2020, 2:01 a.m.