MC5_Methods: Load list of level 5 multiple-concentration cutoff methods
In GladiaTOX: R Package for Processing High Content Screening data

Description Usage Value Available Methods See Also

mc5_mthds returns a list of additional activity cutoff methods to be used during level 5 multiple-concentration processing.

1	mc5_mthds()

A list of functions

More information about the level 5 multiple-concentration processing is available in the package vignette, "Pipeline_Overview."

bmad3: Add a cutoff value of 3*bmad.
pc20: Add a cutoff value of 20.
log2_1.2: Add a cutoff value of log2(1.2).
log10_1.2: Add a cutoff value of log10(1.2).
bmad5: Add a cutoff value of 5*bmad.
bmad6: Add a cutoff value of 6*bmad.
bmad10: Add a cutoff value of 10*bmad.
log2_2: Add a cutoff value of log2(2).
log10_2: Add a cutoff value of log10(2).
neglog2_0.88: Add a cutoff value of -1*log2(0.88).
vmad3: Add a cutoff value of 3*vmad.
vmad5: Add a cutoff value of 5*vmad.
vmad10: Add a cutoff value of 10*vmad.

mc5, Method functions to query what methods get applied to each aeid

GladiaTOX documentation built on Nov. 15, 2020, 2:07 a.m.

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