Files in GeneAnswers
Integrated Interpretation of Genes
NAMESPACE
DESCRIPTION
build/vignette.rds
data/mouseGeneInput.rda
data/HsIALite.rda
data/DOLiteTerm.rda
data/DO.rda
data/datalist
data/RnIALite.rda
data/DmIALite.rda
data/DOLite.rda
data/humanExpr.rda
data/humanGeneInput.rda
data/mouseExpr.rda
data/MmIALite.rda
data/sampleGroupsData.rda
R/getDOLiteTerms.R
R/getPATHList.R
R/geneAnswersConcepts.R
R/topPATH.R
R/categoryNet.R
R/getSymbols.R
R/getConnectedGraph.R
R/geneAnswersReadable.R
R/geneConceptNet.R
R/getREACTOMEPATHList.R
R/geneAnnotationHeatmap.R
R/getCategoryTerms.R
R/topcaBIO.PATHGenes.R
R/getHomoGeneIDs.R
R/topGOGenes.R
R/geneAnswersChartPlots.R
R/geneAnswersBuilder.R
R/geneAnswersConceptNet.R
R/getMultiLayerGraphIDs.R
R/getGOList.R
R/geneAnswersHomoMapping.R
R/topcaBIO.PATH.R
R/topDOLITE.R
R/chartPlots.R
R/geneAnswersConceptRelation.R
R/getConceptTable.R
R/getPATHTerms.R
R/searchEntrez.R
R/geneAnswersHeatmap.R
R/getNextGOIDs.R
R/entrez2caBIO.R
R/getTotalGeneNumber.R
R/zzz.R
R/getCategoryList.R
R/topGO.R
R/GeneAnswersClass.R
R/topCategory.R
R/getListGIF.R
R/drawTable.R
R/groupReport.R
R/buildNet.R
R/topREACTOME.PATH.R
R/topREACTOME.PATHGenes.R
R/topDOLITEGenes.R
R/topPATHGenes.R
R/caBIO2entrez.R
R/getREACTOMEPATHTerms.R
R/topCategoryGenes.R
R/getcaBIOPATHTerms.R
R/getSingleLayerGraphIDs.R
R/geneAnswersSort.R
R/getcaBIOPATHList.R
vignettes/geneInteraction03.jpg
vignettes/tmp.png
vignettes/multi.jpg
vignettes/geneAnswers.Rnw
vignettes/conceptNet01a.jpg
vignettes/geneInteraction04.jpg
vignettes/getListGIF.Rnw
vignettes/geneInteraction01.jpg
vignettes/conceptNet04.jpg
vignettes/gostrt.jpg
vignettes/barplot01.jpg
vignettes/nodeAttrFileFormat.png
vignettes/geneInteraction02.jpg
vignettes/conceptNet07.jpg
vignettes/conceptNet05.jpg
vignettes/piechart01.jpg
vignettes/flowChart_summarization.png
vignettes/flowchart.jpg
vignettes/conceptNet01.jpg
vignettes/conceptNet03.jpg
vignettes/conceptNet02.jpg
vignettes/concept01.jpg
vignettes/conceptNet06.jpg
vignettes/flowchart.png
man/getPATHList.Rd
man/getGOList.Rd
man/geneConceptNet.Rd
man/topCategoryGenes.Rd
man/topPATHGenes.Rd
man/topPATH.Rd
man/topGOGenes.Rd
man/geneAnswersChartPlots.Rd
man/mouseGeneInput.Rd
man/getListGIF.Rd
man/MmIALite.Rd
man/categoryNet.Rd
man/getREACTOMEPATHList.Rd
man/getcaBIOPATHList.Rd
man/getSingleLayerGraphIDs.Rd
man/getcaBIOPATHTerms.Rd
man/HsIALite.Rd
man/DO.Rd
man/topREACTOME.PATH.Rd
man/getTotalGeneNumber.Rd
man/entrez2caBIO.Rd
man/getCategoryTerms.Rd
man/geneAnswersConcepts.Rd
man/topREACTOME.PATHGenes.Rd
man/geneAnswersHomoMapping.Rd
man/geneAnswersHeatmap.Rd
man/getConceptTable.Rd
man/DOLiteTerm.Rd
man/getMultiLayerGraphIDs.Rd
man/getConnectedGraph.Rd
man/humanExpr.Rd
man/topDOLITE.Rd
man/drawTable.Rd
man/humanGeneInput.Rd
man/geneAnnotationHeatmap.Rd
man/geneAnswersConceptNet.Rd
man/searchEntrez.Rd
man/getCategoryList.Rd
man/getHomoGeneIDs.Rd
man/DmIALite.Rd
man/geneAnswersReadable.Rd
man/mouseExpr.Rd
man/getNextGOIDs.Rd
man/getREACTOMEPATHTerms.Rd
man/topCategory.Rd
man/geneAnswersBuilder.Rd
man/DOLite.Rd
man/RnIALite.Rd
man/getSymbols.Rd
man/geneAnswersConceptRelation.Rd
man/topDOLITEGenes.Rd
man/groupReport.Rd
man/chartPlots.Rd
man/topGO.Rd
man/caBIO2entrez.Rd
man/GeneAnswers-package.Rd
man/topcaBIO.PATH.Rd
man/sampleGroupsData.Rd
man/GeneAnswers-class.Rd
man/getPATHTerms.Rd
man/buildNet.Rd
man/getDOLiteTerms.Rd
man/caBIO.PATHGenes.Rd
man/geneAnswersSort.Rd
inst/NEWS
inst/doc/geneAnswers.Rnw
inst/doc/getListGIF.Rnw
inst/doc/geneAnswers.pdf
inst/doc/getListGIF.R
inst/doc/getListGIF.pdf
inst/doc/geneAnswers.R
inst/External/NetworkTransformer.jar
inst/External/js/src/cytoscapeweb.js
inst/External/js/src/AC_OETags.js
inst/External/js/src/json2.js
inst/External/js/cytoscape_web/AC_OETags.min.js
inst/External/js/cytoscape_web/json2.min.js
inst/External/js/cytoscape_web/cytoscapeweb.min.js
inst/External/swf/CytoscapeWeb.swf
inst/External/swf/playerProductInstall.swf
