The functions or variables listed here are no longer part of GOstats as they are not needed (any more).
1 2 3 4 5 6 7 | combGOGraph()
hyperGtable()
hyperG2Affy()
selectedGenes()
GOHyperG()
GOKEGGHyperG()
getGoGraph()
|
combGOGraph
was replaced by join
.
hyperGtable
was replaced by summary
.
hyperG2Affy
was replaced by probeSetSummary
.
GOLeaves
was replaced by graph::leaves
.
selectedGenes
was replaced by geneIdsByCategory
.
GOHyperG
was replaced by hyperGTest
.
GOKEGGHyperG
was replaced by hyperGTest
.
getGoGraph
was replaced by GOGraph
.
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