fuzzySearch: Fuzzysearch is a searching function for a string or a list of...

In ENCODExplorer: A compilation of ENCODE metadata

Description

Fuzzysearch is a searching function for a string or a list of string within the encode_df data.table. For faster processing, pass encode_df object as database parameter.

Usage

fuzzySearch(
  searchTerm = NULL,
  database = get_encode_df(),
  filterVector = NULL,
  multipleTerm = FALSE,
  ignore_case = TRUE
)

Arguments

searchTerm	The keyword or a list of keyword to search.
database	A data.table with similar format as encode_df database.
filterVector	A character to apply the search on specific column.
multipleTerm	A boolean that indicate if the searchTerm is a list or even multiple searchTerm separete by a comma in a single string.
ignore_case	A boolean to enable the case sensitivity.

Value

A data.table corresponding the every row of the database that contain at least of one the searchTerm.

Examples

 
   fuzz_ex <- fuzzySearch(searchTerm=c("ELAVL1","atf7"),
   database=get_encode_df_demo(), filterVector ="target", multipleTerm = TRUE)

ENCODExplorer documentation built on Nov. 8, 2020, 5:11 p.m.