getNodes-graphGML-method: get nodes from graphGML object

In CytoML: A GatingML Interface for Cross Platform Cytometry Data Sharing

Description

get nodes from graphGML object

Usage

## S4 method for signature 'graphGML'
getNodes(x, y, order = c("default", "bfs", "dfs", "tsort"), only.names = TRUE)

Arguments

x	graphGML
y	character node index. When missing, return all the nodes
order	character specifying the order of nodes. options are "default", "bfs", "dfs", "tsort"
only.names	logical specifiying whether user wants to get the entire nodeData or just the name of the population node

Value

It returns the node names and population names by default. Or return the entire nodeData associated with each node.

Examples

## Not run: 
g <- read.gatingML.cytobank(xmlfile)
getNodes(g)
getNodes(g, only.names = FALSE)

## End(Not run)

CytoML documentation built on March 12, 2021, 2 a.m.