Files in CytoML
A GatingML Interface for Cross Platform Cytometry Data Sharing
logo_mid.png
README.Rmd
configure
_pkgdown.yml
CONDUCT.md
logo.png
NEWS.md
README.md
NAMESPACE
configure.ac
DESCRIPTION
LICENSE
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R/RcppExports.R
R/compensation.R
R/flowUtils_functions.R
R/read.gatingML.cytobank.R
R/AllClasses.R
R/gate-methods.R
R/GatingSet2flowJo.R
R/gatingML.R
R/graphGML_methods.R
R/helperFunctions.R
R/writeGatingML.R
R/cytobankExperiment.R
R/cytolibml_bin_path.R.in
R/cytolibml_bin_path.R
R/diva2GatingSet.R
R/cytobank2GatingSet.R
R/flowJoWorkspace_Methods.R
R/zzz.R
R/transforms.R
R/parameter-methods.R
R/GatingSet2cytobank.R
R/utils.R
src/Makevars.win
src/Makevars
src/RcppExports.cpp
src/parseFlowJoWorkspace.cpp
src/Makevars.in
inst/defaults.xml
inst/CITATION
inst/include/CytoML.h
inst/include/CytoML/workspace.hpp
inst/include/CytoML/winFlowJoWorkspace.hpp
inst/include/CytoML/flowJoWorkspace.hpp
inst/include/CytoML/wsNode.hpp
inst/include/CytoML/workspace_type.hpp
inst/include/CytoML/search_sample.hpp
inst/include/CytoML/openWorkspace.hpp
inst/include/CytoML/macFlowJoWorkspace.hpp
inst/doc/cytobank2GatingSet.html
inst/doc/flowjo_to_gatingset.Rmd
inst/doc/flowjo_to_gatingset.html
inst/doc/cytobank2GatingSet.Rmd
inst/doc/HowToExportGatingSet.R
inst/doc/flowjo_to_gatingset.R
inst/doc/HowToExportGatingSet.Rmd
inst/doc/cytobank2GatingSet.R
inst/doc/HowToExportGatingSet.html
inst/extdata/cytobank_experiment.acs
inst/extdata/cytotrol_tcell_cytobank_logt_counts.csv
inst/extdata/winlist.wlx
inst/extdata/logtGml.xml
inst/schema/CytoML.v1.0.xsd
inst/cppTest/unitTest/gatingSet_test.cpp
inst/cppTest/unitTest/testSuite.cpp
inst/cppTest/unitTest/test_header.hpp
build/vignette.rds
tests/testthat.R
tests/testthat/flowJoWorkspace-testSuite.R
tests/testthat/test-flowjo2gs.R
tests/testthat/diva2gs-InternalTestSuite.R
tests/testthat/flowjo2gs_internalTestSuite.R
tests/testthat/test-internal-suite.R
tests/testthat/test-cytobank.R
tests/testthat/Cytobank2GatingSet-InternalTestSuite.R
tests/testthat/test-extend.R
tests/testthat/test-GatingSet2flowJo.R
tests/testthat/test-diva2gs.R
tests/testthat/GatingSet2flowJo-InternalTestSuite.R
tests/testthat/helper-lib.R
tests/testthat/expect_result/flowJoWorkspace_expect.rds
vignettes/HowToParseGatingML.html
vignettes/flowjo_to_gatingset.Rmd
vignettes/cytobank2GatingSet.Rmd
vignettes/cytobank.png
vignettes/HowToExportGatingSet.Rmd
vignettes/flowJo.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/favicon.ico
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-60x60.png
tools/winlibs.R
man/parse.gateInfo.Rd
man/cytobank_experiment-methods.Rd
man/ce_get_samples.Rd
man/ce_get_panels.Rd
man/flowjo_workspace-class.Rd
man/getNodes-graphGML-method.Rd
man/diva_to_gatingset.Rd
man/getTransformations.graphGML.Rd
man/fj_ws_get_samples.Rd
man/diva_get_samples.Rd
man/open_cytobank_experiment.Rd
man/gatingset_to_flowjo.Rd
man/open_diva_xml.Rd
man/ce_get_transformations.Rd
man/constructTree.Rd
man/fj_ws_get_sample_groups.Rd
man/CytoML-deprecated.Rd
man/ce_get_compensations.Rd
man/matchPath.Rd
man/gs_compare_cytobank_counts.Rd
man/extend.Rd
man/diva_workspace-class.Rd
man/compensate-GatingSet-graphGML-method.Rd
man/plot-graphGML-missing-method.Rd
man/flowjo_to_gatingset.Rd
man/range.GatingHierarchy.Rd
man/getCompensationMatrices.graphGML.Rd
man/cytobank_to_gatingset.Rd
man/getGate-graphGML-character-method.Rd
man/show-graphGML-method.Rd
man/getParent-graphGML-character-method.Rd
man/gatingset_to_cytobank.Rd
man/graphGML-class.Rd
man/fj_ws_get_keywords.Rd
man/read.gatingML.cytobank.Rd
man/CytoML.par.get.Rd
man/addCustomInfo.Rd
man/CytoML.par.init.Rd
man/getChildren-graphGML-character-method.Rd
man/open_flowjo_xml.Rd
man-roxygen/template-depr_fun.R
man-roxygen/template-depr_pkg.R
docs/logo_mid.png
docs/pkgdown.yml
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon-120x120.png
docs/favicon-16x16.png
docs/404.html
docs/docsearch.css
docs/apple-touch-icon-180x180.png
docs/logo.png
docs/link.svg
docs/favicon.ico
docs/CONDUCT.html
docs/authors.html
docs/pkgdown.css
docs/favicon-32x32.png
docs/apple-touch-icon.png
docs/pkgdown.js
docs/docsearch.js
docs/apple-touch-icon-152x152.png
docs/bootstrap-toc.js
docs/LICENSE-text.html
docs/bootstrap-toc.css
docs/apple-touch-icon-60x60.png
docs/index.html
docs/articles/cytobank2GatingSet.html
docs/articles/cytobank.png
docs/articles/flowJo.png
docs/articles/HowToExportGatingSet.html
docs/articles/index.html
docs/articles/cytobank2GatingSet_files/header-attrs-2.3/header-attrs.js
docs/articles/cytobank2GatingSet_files/figure-html/unnamed-chunk-6-1.png
docs/articles/cytobank2GatingSet_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/HowToExportGatingSet_files/header-attrs-2.3/header-attrs.js
docs/articles/HowToExportGatingSet_files/figure-html/unnamed-chunk-3-1.png
docs/articles/HowToExportGatingSet_files/accessible-code-block-0.0.1/empty-anchor.js
docs/reference/extend.html
docs/reference/diva_get_sample_groups.html
docs/reference/getParent-graphGML-character-method.html
docs/reference/diva_to_gatingset.html
docs/reference/cytobank_to_gatingset.html
docs/reference/ce_get_panels.html
docs/reference/parse.gateInfo.html
docs/reference/open_flowjo_xml.html
docs/reference/gs_compare_cytobank_counts.html
docs/reference/flowjo_to_gatingset.html
docs/reference/ce_get_transformations.html
docs/reference/getNodes-graphGML-method.html
docs/reference/open_diva_xml.html
docs/reference/ce_get_compensations.html
docs/reference/range.GatingHierarchy.html
docs/reference/fj_ws_get_keywords.html
docs/reference/fj_ws_get_sample_groups.html
docs/reference/addCustomInfo.html
docs/reference/getCompensationMatrices.graphGML.html
docs/reference/CytoML.par.init.html
docs/reference/cytobank_experiment-methods.html
docs/reference/graphGML-class.html
docs/reference/fj_ws_get_samples.html
docs/reference/ce_get_samples.html
docs/reference/CytoML-deprecated.html
docs/reference/extend-1.png
docs/reference/flowjo_workspace-class.html
docs/reference/diva_workspace-class.html
docs/reference/constructTree.html
docs/reference/gating-methods.html
docs/reference/getGate-graphGML-character-method.html
docs/reference/getTransformations.graphGML.html
docs/reference/diva_get_samples.html
docs/reference/plot-graphGML-missing-method.html
docs/reference/open_cytobank_experiment.html
docs/reference/read.gatingML.cytobank.html
docs/reference/getChildren-graphGML-character-method.html
docs/reference/show-graphGML-method.html
docs/reference/matchPath.html
docs/reference/CytoML.par.get.html
docs/reference/compensate-GatingSet-graphGML-method.html
docs/reference/gatingset_to_flowjo.html
docs/reference/gatingset_to_cytobank.html
docs/reference/index.html
docs/news/index.html
