TxDb2GR: TxDb object to GRanges
In ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges
Description
convert TxDb object to GRanges
Usage
1
TxDb2GR(ranges, feature, OrganismDb)
Arguments
ranges
an Txdb object
feature
feature type, could be geneModel, gene, exon,
transcript, CDS, fiveUTR, threeUTR, microRNA, and tRNA
OrganismDb
org db object
ChIPpeakAnno documentation built on April 1, 2021, 6:01 p.m.
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Description
convert TxDb object to GRanges
Usage
1 | TxDb2GR(ranges, feature, OrganismDb)
|
Arguments
ranges |
an Txdb object |
feature |
feature type, could be geneModel, gene, exon, transcript, CDS, fiveUTR, threeUTR, microRNA, and tRNA |
OrganismDb |
org db object |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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