paramDistBoxplot: paramDistBoxplot

In ChIPexoQual: ChIPexoQual

Description

paramDistBoxplot returns a ggplot object with a boxplot comparing the ntimes estimations of the chosen parameter.

Usage

paramDistBoxplot(..., names.input = NULL, which.param = "beta1",
  sort.as.numeric = FALSE)

Arguments

...	a list of ExoData objects, or several ExoData objects by themselves.
names.input	a character vector with the names to use in the plot. If it is empty paramDistBoxplot is going to create the names as the names of the list when they are available or is going to name them as Sample: 1 ,... , Sample: k.
which.param	a character value with either "beta1" or "beta2" that determines which paramters in the model depth_i ~ uniquePos_i + width_i to plot. The default value is "beta1".
sort.as.numeric	a logical value indicating if the values of names.input are meant to be interpreted as numeric and sorted accordingly.

Value

A ggplot2 object with the boxplot of the chosen parameter

Examples

data(exoExample)
paramDistBoxplot(exoExample)

ChIPexoQual documentation built on Nov. 8, 2020, 8:22 p.m.