initialize-CellModel-method: Constructor for CellModel

In CancerInSilico: An R interface for computational modeling of tumor progression

Description

Constructor for CellModel

Usage

## S4 method for signature 'CellModel'
initialize(.Object, initialNum, runTime, density,
  boundary = 1, syncCycles = FALSE, randSeed = 0,
  outputIncrement = 4, recordIncrement = 0.1, timeIncrement = 0.001,
  cellTypes = c(new("CellType", name = "DEFAULT")),
  cellTypeInitFreq = c(1), drugs = list(), ...)

Arguments

.Object	CellModel object
initialNum	initial number of cells
runTime	run time of the model in hours
density	initial density of the cell population
boundary	impose a physical boundary on the cells
syncCycles	synchronization all cells to the same point in the cycle
randSeed	random seed
outputIncrement	how often (model hours) to print simulation status
recordIncrement	how oftern (model hours) to record cell information
timeIncrement	internal time step (model hours) used by the model
cellTypes	list of CellType objects
cellTypeInitFreq	initial proportions of all cell types
drugs	list of Drug objects
...	model specific parameters

Value

initialized cell model object

CancerInSilico documentation built on Nov. 8, 2020, 6:32 p.m.