plotPsSpectrum.xsAnnotate: Plot a Pseudospectrum

In CAMERA: Collection of annotation related methods for mass spectrometry data

Description

Plot a pseudospectrum, with the most intense peaks labelled, to the current graphics device.

Usage

  plotPsSpectrum(object, pspec=1:length(object@pspectra), log=FALSE, value="into", maxlabel=0, title=NULL,mzrange=numeric(), sleep=0, cexMulti = 1,...)

Arguments

object	the xsAnnotate object
pspec	ID of the pseudospectrum to print
log	Boolean, whether the log(intensity) should be shown
value	Which of a peak's intensities should be used
maxlabel	How many m/z labels to print
title	Main title of the Plot
mzrange	Which m/z range should plotted
sleep	Time (in seconds) to wait between successive Spectra, if multiple pspec are requested.
cexMulti	Cex multiplier for peak labels
...	Additional parameter for function plot

Value

None.

Methods

signature(object = "xsAnnotate")

object deriviving from class "xsAnnotate"

Author(s)

Steffen Neumann, [e-mail]

See Also

xsAnnotate-class, png, pdf, postscript,

CAMERA documentation built on Nov. 8, 2020, 4:59 p.m.