Files in BubbleTree
BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data
NAMESPACE
DESCRIPTION
Rprofile
build/vignette.rds
data/allCNV.lst.RData
data/gene.uni.clean.gr.rda
data/allHetero.lst.RData
data/allCall.lst.RData
data/datalist
data/cnv.gr.rda
data/vol.genes.rda
data/snp.gr.rda
data/cancer.genes.minus2.rda
data/cyto.gr.rda
data/allRBD.lst.RData
data/centromere.dat.rda
data/hg19.seqinfo.rda
data/all.somatic.lst.RData
R/BTreePredictor.R
R/Utils.R
R/BTreePlotter.R
R/RBD.R
R/TrackPlotter.R
R/Annotate.R
vignettes/BubbleTree-vignette.Rmd
vignettes/figures/HCC11_Primary_with_ann.png
examples/heteroLociTrack-Ex.R
examples/annoByGenesAndCyto-Ex.R
examples/btpredict-Ex.R
examples/trackBTree-Ex.R
examples/info-Ex.R
examples/drawBTree-Ex.R
examples/xyTrack-Ex.R
examples/RscoreTrack-Ex.R
examples/loadRBD-Ex.R
examples/getTracks-Ex.R
examples/makeRBD-Ex.R
examples/btcompare-Ex.R
examples/saveXLS-Ex.R
examples/bafTrack-Ex.R
examples/drawBubbles-Ex.R
examples/drawFeatures-Ex.R
man/btcompare.Rd
man/BTreePredictor.Rd
man/cyto.gr.Rd
man/mergeSnpCnv.Rd
man/saveXLS.Rd
man/hg19.seqinfo.Rd
man/RBD.Rd
man/getTracks.Rd
man/drawBubbles.Rd
man/RscoreTrack.Rd
man/bafTrack.Rd
man/btpredict.Rd
man/gene.uni.clean.gr.Rd
man/vol.genes.Rd
man/annoByGenesAndCyto.Rd
man/snp.gr.Rd
man/makeRBD.Rd
man/allCall.lst.Rd
man/Annotate.Rd
man/cnv.gr.Rd
man/allCNV.lst.Rd
man/drawFeatures.Rd
man/centromere.dat.Rd
man/loadRBD.Rd
man/allHetero.lst.Rd
man/all.somatic.lst.Rd
man/info.Rd
man/heteroLociTrack.Rd
man/BTreePlotter.Rd
man/xyTrack.Rd
man/allRBD.lst.Rd
man/cancer.genes.minus2.Rd
man/TrackPlotter.Rd
man/trackBTree.Rd
man/drawBTree.Rd
inst/NEWS
inst/doc/BubbleTree-vignette.R
inst/doc/BubbleTree-vignette.html
inst/doc/BubbleTree-vignette.Rmd
