largestComp: Extract largest component of network

In BioNet: Routines for the functional analysis of biological networks

Description

The function extracts the largest component of a network.

Usage

largestComp(network)

Arguments

network

A graph in graphNEL or igraph format.

Value

A new graph object that represents the largest component of the given network.

Author(s)

Marcus Dittrich

Examples

library(DLBCL)
data(interactome)
interactome
largestComp(interactome)

Example output

Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    anyDuplicated, append, as.data.frame, basename, cbind, colnames,
    dirname, do.call, duplicated, eval, evalq, Filter, Find, get, grep,
    grepl, intersect, is.unsorted, lapply, Map, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank,
    rbind, Reduce, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which.max, which.min

Loading required package: RBGL
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

A graphNEL graph with undirected edges
Number of Nodes = 9386 
Number of Edges = 36504 
A graphNEL graph with undirected edges
Number of Nodes = 8989 
Number of Edges = 36167 

BioNet documentation built on Nov. 8, 2020, 5:48 p.m.