API for xyang2uchicago/seq2pathway
a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data
| Global functions | |
|---|---|
| Chipseq_Peak_demo | Man page |
| FAIME | Source code |
| FAIME_EmpiricalP | Source code |
| FisherTest_GO_BP_MF_CC | Man page Source code |
| FisherTest_MsigDB | Man page Source code |
| GRanges_demo | Man page |
| KSrank | Source code |
| KSrank_EmpiricalP | Source code |
| Normalize_F | Source code |
| Peak_Gene_Collapse | Source code |
| Sys.which2 | Source code |
| addDescription | Man page Source code |
| cumulativerank | Source code |
| cumulativerank_EmpiricalP | Source code |
| dat_RNA | Man page |
| dat_chip | Man page |
| gene2pathway_test | Man page Source code |
| get_python3_command_path | Source code |
| plotTop10 | Man page Source code |
| rungene2pathway | Source code |
| rungene2pathway_EmpiricalP | Source code |
| runseq2gene | Man page Source code |
| runseq2pathway | Man page Source code |
