plotSpec-methods: Plot mass spectra from the profile matrix

In xiaodfeng/DynamicXCMS: LC-MS and GC-MS Data Analysis

Plot mass spectra from the profile matrix

Description

Uses the pre-generated profile mode matrix to plot mass spectra over a specified retention time range.

Arguments

object	the xcmsRaw object
ident	logical, use mouse to identify and label peaks
vline	numeric vector with locations of vertical lines
...	arguments passed to profRange

Value

If ident == TRUE, an integer vector with the indecies of the points that were identified. Otherwise a two-column matrix with the plotted points.

Methods

object = "xcmsRaw"

plotSpec(object, ident = FALSE, vline = numeric(0), ...)

See Also

xcmsRaw-class

xiaodfeng/DynamicXCMS documentation built on Aug. 6, 2023, 3:02 p.m.