inst/helpers/plotVelocity.md
In whtns/seuratTools: Tools for Managing Seurat Objects
RNA Velocity
Plot RNA Velocity of data using velocyto. Velocity can be represented on UMAP or tSNE as arrows or a grid. Plots can be displayed within the app or exported to pdf.
Velocyto requires the generation of a loom file. This file must be generated separately from the seurat object. To enable plotting of RNA velocity, the path to the corresponding loom file must be provided.
whtns/seuratTools documentation built on Oct. 28, 2024, 7:18 a.m.
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RNA Velocity
Plot RNA Velocity of data using velocyto. Velocity can be represented on UMAP or tSNE as arrows or a grid. Plots can be displayed within the app or exported to pdf.
Velocyto requires the generation of a loom file. This file must be generated separately from the seurat object. To enable plotting of RNA velocity, the path to the corresponding loom file must be provided.
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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