inst/helpers/pathwayEnrichment.md
In whtns/seuratTools: Tools for Managing Seurat Objects
Pathway Enrichment Analysis
Pathway enrichment is determined based on marker genes.
Reference pathway datasets include:
1. 'GO_Biological_Process_2018',
2. 'GO_Cellular_Component_2018',
3. 'GO_Molecular_Function_2018',
4. 'KEGG_2016',
5. 'WikiPathways_2016',
6. 'Reactome_2016',
7. 'Panther_2016',
8. 'Human_Gene_Atlas',
9. 'Mouse_Gene_Atlas'
whtns/seuratTools documentation built on Oct. 28, 2024, 7:18 a.m.
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Pathway Enrichment Analysis
Pathway enrichment is determined based on marker genes.
Reference pathway datasets include: 1. 'GO_Biological_Process_2018', 2. 'GO_Cellular_Component_2018', 3. 'GO_Molecular_Function_2018', 4. 'KEGG_2016', 5. 'WikiPathways_2016', 6. 'Reactome_2016', 7. 'Panther_2016', 8. 'Human_Gene_Atlas', 9. 'Mouse_Gene_Atlas'
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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