waldronlab/MicrobiomeBenchmarkData: Datasets for benchmarking in microbiome research
The MicrobiomeBenchmarkData package provides functionality to access microbiome datasets suitable for benchmarking. These datasets have some biological truth, which allows to have expected results for comparison. The datasets come from various published sources and are provided as TreeSummarizedExperiment objects. Currently, only datasets suitable for benchmarking differential abundance methods are available.
Getting started
Browse package contents
Package details |
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| Bioconductor views | ExperimentData MicrobiomeData ReproducibleResearch SequencingData |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.9.0 |
| URL | https://github.com/waldronlab/MicrobiomeBenchmarkData http://waldronlab.io/MicrobiomeBenchmarkData/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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