NEWS.md

In waldronlab/HMP16SData: 16S rRNA Sequencing Data from the Human Microbiome Project

HMP16SData 1.8.0

• Thank you for using HMP16SData and citing it in your work : )

HMP16SData 1.6.0

• Citations with links for publications added to the primary vignette
• Not much else needs work, happy to take user suggestions though : )

HMP16SData 1.4.0

• bioRxiv manuscript was published in the American Journal of Epidemiology
• Updated the CITATION and README.md files with the new publication details
• Added ExperimentHub to biocViews to avoid BiocCheck notes
• Made minor corrections to GitHub bug report and feature request templates

HMP16SData 1.2.0

• The package vignette has been significantly expanded to show more analysis
• Attaching dbGaP metadata is quieter and attach_dbGaP checks for existing files
• Internal corrections to function syntax to avoid BiocCheck notes
• Additional files added to GitHub to meet recommended community guidelines

HMP16SData 1.0.0

• HMP 16S rRNA sequencing data for variable regions 1–3 and 3–5
• Processed data provided as SummarizedExperiment objects
• A method to attach dbGaP metadata to SummarizedExperiment objects
• A method to coerce SummarizedExperiment objects to phyloseq objects

waldronlab/HMP16SData documentation built on Nov. 4, 2024, 7:50 a.m.