plot_distribution_scExp: Plotting distribution of signal

In vallotlab/ChromSCape: Analysis of single-cell epigenomics datasets with a Shiny App

Plotting distribution of signal

Description

Plotting distribution of signal

Usage

plot_distribution_scExp(
  scExp,
  raw = TRUE,
  log10 = FALSE,
  pseudo_counts = 1,
  bins = 150
)

Arguments

scExp	A SingleCellExperiment Object
raw	Use raw counts ?
log10	Transform using log10 ?
pseudo_counts	Pseudo-count to add if using log10
bins	Number of bins in the histogram

Value

A ggplot histogram representing the distribution of count per cell

Examples

data("scExp")
plot_distribution_scExp(scExp)

vallotlab/ChromSCape documentation built on Oct. 15, 2023, 1:47 p.m.