plot_differential_summary_scExp: Differential summary barplot

In vallotlab/ChromSCape: Analysis of single-cell epigenomics datasets with a Shiny App

Differential summary barplot

Description

Differential summary barplot

Usage

plot_differential_summary_scExp(
  scExp_cf,
  qval.th = 0.01,
  logFC.th = 1,
  min.percent = 0.01
)

Arguments

scExp_cf	A SingleCellExperiment object
qval.th	Adjusted p-value threshold. (0.01)
logFC.th	Fold change threshold. (1)
min.percent	Minimum fraction of cells having the feature active to consider it as significantly differential. (0.01)

Value

A barplot summary of differential analysis

Examples

data("scExp")
plot_differential_summary_scExp(scExp)

vallotlab/ChromSCape documentation built on Oct. 15, 2023, 1:47 p.m.