inst/helpfiles/tabPanel_meanSd_missingValue_FALSE.md
In tnaake/MatrixQCvis: Shiny-based interactive data-quality exploration for omics data
Mean-sd plots
The panel shows the three mean-sd (standard deviation) plots for
normalized+transformed (transformed), and
normalized+transformed+batch corrected (batch corrected)
assay values.
The sd and mean are calculated feature-wise from the values of the
respective data set. The plot allows to visualize if there is a dependence
of the sd on the mean. The red line depicts the running median estimator
(window-width 10%). In case of sd-mean independence, the running median
should be approximately horizontal.
tnaake/MatrixQCvis documentation built on Nov. 4, 2024, 7:42 a.m.
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Mean-sd plots
The panel shows the three mean-sd (standard deviation) plots for normalized+transformed (transformed), and normalized+transformed+batch corrected (batch corrected) assay values. The sd and mean are calculated feature-wise from the values of the respective data set. The plot allows to visualize if there is a dependence of the sd on the mean. The red line depicts the running median estimator (window-width 10%). In case of sd-mean independence, the running median should be approximately horizontal.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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