timpeters82/DMRcate-devel: Methylation array and sequencing spatial analysis methods
De novo identification and extraction of differentially methylated regions (DMRs) from the human genome using Whole Genome Bisulfite Sequencing (WGBS) and Illumina Infinium Array (450K and EPIC) data. Provides functionality for filtering probes possibly confounded by SNPs and cross-hybridisation. Includes GRanges generation and plotting functions.
Getting started
Browse package contents
Package details |
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| Author | Tim Peters |
| Bioconductor views | Coverage DNAMethylation DataImport DifferentialExpression DifferentialMethylation Epigenetics GeneExpression Genetics GenomeAnnotation MethylationArray Microarray MultipleComparison OneChannel Preprocessing QualityControl Sequencing TimeCourse TwoChannel WholeGenome |
| Maintainer | Tim Peters <t.peters@garvan.org.au> |
| License | file LICENSE |
| Version | 3.0.10 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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