bindWidth | ChIP-seq Binding Width And Peak Window Size Estimation |
gcapcPeaks | GC Effects Aware Peak Calling |
gcEffects | ChIP-seq GC Effects Estimation |
peaksCAT | CATplot of Peaks |
read5endCoverage | Reads Coverage Using 5-end Base |
refinePeaks | Refine Peaks with GC Effects |
refineSites | Adjust ChIP-seq Read Count Table |
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