tests/testthat/test_stitchRanges.R

In steveped/chipExtra: Additional functions for working with ChIP-Seq data

x <- GRanges(c("chr1:1-10", "chr1:101-110", "chr1:1001-1010", "chr2:1-10"))

test_that("Exclude works correctly", {

  expect_length(stitchRanges(x, exclude = GRanges("chr1:200:+")), 3)
  expect_length(stitchRanges(x), 2)
  expect_warning(
      stitchRanges(x, exclude = GRanges("chr2:5")),
      "Ranges provided in 'x' overlap barrier ranges"
  )

})