knitr::opts_chunk$set( collapse = TRUE, comment = "#>" )
knitr::include_graphics("../inst/vignettes/tidybulk_logo.png")
A more detailed schedule can be found here.
Format: a few introductory slides, then demos, exercises plus Q&A.
Interact: Zoom chat and polls
“The transcriptome is the set of all RNA transcripts, including coding and non-coding, in an individual or a population of cells”
Wikipedia
knitr::include_graphics("../inst/vignettes/transcriptomics.jpg")
knitr::include_graphics("../inst/vignettes/ScreenShot1.png")
knitr::include_graphics("../inst/vignettes/ScreenShot2.png")
knitr::include_graphics("../inst/vignettes/ScreenShot3.png")
knitr::include_graphics("../inst/vignettes/RPharma2020pipeline-01.png")
knitr::include_graphics("../inst/vignettes/bulk_vs_single.jpg")
Shalek and Benson, 2017
knitr::include_graphics("../inst/vignettes/RPharma2020pipeline-02.png")
Easiest way to run this material. Only available during workshop.
* You should have received an invite to join the classroom in the R in Pharma Organization space in RStudio Cloud.
* Login and click the "Start" button as shown in the screenshot below
* Open tidytranscriptomics.Rmd
in vignettes
folder
knitr::include_graphics("../inst/vignettes/rstudio_cloud.png")
If you want to install on your own computer, see instructions here. We recommend using the Cloud during the RPharma workshop and this method if you want to run the material after the workshop.
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