R/data.R

In stemangiola/bioc2021_tidytranscriptomics: Introduction to Tidy Transcriptomics

#' BRCA
#'
#' Subset of the TCGA BRCA data set
#'
#' @format  A tidy data frame.
#' @usage data(BRCA)
"BRCA"

#' pbmc
#'
#' A SingleCellExperiment dataset of single cell RNA sequencing data
#'
#' @format  A SingleCellExperiment object.
#' @usage data(pbmc)
"pbmc"

#' mito_info_all_datasets
#'
#' A SingleCellExperiment dataset of single cell RNA sequencing data. Used for one of the exercises
#'
#' @format  A SingleCellExperiment object.
#' @usage data(mito_info_all_datasets)
"mito_info_all_datasets"

#' pbmc_integrated
#'
#' A SingleCellExperiment dataset of single cell RNA sequencing data. Used for avoiding to wait for calculations
#'
#' @format  A SingleCellExperiment object.
#' @usage data(pbmc_integrated)
"pbmc_integrated"