In shwetagopaul92/restfulSEData: Example metadata for the "restfulSE" R package

Introduction

This package includes SummarizedExperiment or RangedSummarizedExperiment instances from which assay data has been removed, so that it can be restored in real time from remote stores.

• The example given below elaborates on how to access the data from the standard ExperimentHub interface :

library(ExperimentHub)
ehub = ExperimentHub()
myfiles <- query(ehub , "restfulSEData")
myfiles
myfiles[[1]]
myfiles[["EH551"]] #load by EH id

• To get a flavor of the datasets present :

dataResource()

• To use the data with "restfulSE" R package : We grab the ExperimentHub ID of the dataset we are interested in.

```{use data}

myfiles[["EH551"]] -> banoSEMeta banoSEMeta ```

shwetagopaul92/restfulSEData documentation built on May 30, 2019, 7:10 p.m.