API for shenlab-sinai/geneoverlap-old
Test and visualize gene overlaps
| Global functions | |
|---|---|
| GeneOverlap-class | Man page |
| GeneOverlap-package | Man page |
| GeneOverlapMatrix-class | Man page |
| [ | Man page |
| [,GeneOverlapMatrix-method | Man page |
| drawHeatmap | Man page |
| drawHeatmap,GeneOverlapMatrix-method | Man page |
| getContbl | Man page |
| getContbl,GeneOverlap-method | Man page |
| getGenomeSize | Man page |
| getGenomeSize,GeneOverlap-method | Man page |
| getGsetA | Man page |
| getGsetA,GeneOverlapMatrix-method | Man page |
| getGsetB | Man page |
| getGsetB,GeneOverlapMatrix-method | Man page |
| getIntersection | Man page |
| getIntersection,GeneOverlap-method | Man page |
| getJaccard | Man page |
| getJaccard,GeneOverlap-method | Man page |
| getListA | Man page |
| getListA,GeneOverlap-method | Man page |
| getListB | Man page |
| getListB,GeneOverlap-method | Man page |
| getMatrix | Man page |
| getMatrix,GeneOverlapMatrix-method | Man page |
| getNestedList | Man page |
| getNestedList,GeneOverlapMatrix-method | Man page |
| getOddsRatio | Man page |
| getOddsRatio,GeneOverlap-method | Man page |
| getPval | Man page |
| getPval,GeneOverlap-method | Man page |
| getSelfCompare | Man page |
| getSelfCompare,GeneOverlapMatrix-method | Man page |
| getTested | Man page |
| getTested,GeneOverlap-method | Man page |
| getUnion | Man page |
| getUnion,GeneOverlap-method | Man page |
| gs.RNASeq | Man page |
| hESC.ChIPSeq.list | Man page |
| hESC.RNASeq.list | Man page |
| newGOM | Man page |
| newGeneOverlap | Man page |
| print,GeneOverlap-method | Man page |
| print,GeneOverlapMatrix-method | Man page |
| setGenomeSize<- | Man page |
| setGenomeSize<-,GeneOverlap-method | Man page |
| setListA<- | Man page |
| setListA<-,GeneOverlap-method | Man page |
| setListB<- | Man page |
| setListB<-,GeneOverlap-method | Man page |
| show,GeneOverlap-method | Man page |
| show,GeneOverlapMatrix-method | Man page |
| testGeneOverlap | Man page |
| testGeneOverlap,GeneOverlap-method | Man page |
