selinj/chromswitch: An R package to detect chromatin state switches from epigenomic data

Chromswitch implements a flexible method to detect chromatin state switches between samples in two biological conditions in a specific genomic region of interest given peaks or chromatin state calls from ChIP-seq data.

Getting started

Package details

Bioconductor views Clustering DifferentialPeakCalling Epigenetics FunctionalGenomics GeneExpression HistoneModification ImmunoOncology MultipleComparison Transcription
Maintainer
LicenseMIT + file LICENSE
Version1.15.0
URL https://github.com/sjessa/chromswitch
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("selinj/chromswitch")
selinj/chromswitch documentation built on Jan. 27, 2024, 12:36 p.m.